Monarch geneset OGS2.0

DPOGS202203
TranscriptDPOGS202203-TA1086 bp
ProteinDPOGS202203-PA361 aa
Genomic positionDPSCF300149 - 246850-249277
RNAseq coverage262x (Rank: top 41%)
Annotation
HeliconiusHMEL0092023e-8775.90% 
BombyxBGIBMGA013497-TA2e-16672.61% 
DrosophilamRpS29-PA4e-10953.11% 
EBI UniRef50UniRef50_Q9W2535e-10753.11%LD41023p n=17 Tax=Endopterygota RepID=Q9W253_DROME
NCBI RefSeqXP_001986435.16e-11154.52%GH20533 [Drosophila grimshawi]
NCBI nr blastpgi|1950271271e-10954.52%GH20533 [Drosophila grimshawi]
NCBI nr blastxgi|1950271271e-10654.67%GH20533 [Drosophila grimshawi]
Group
Gene OntologyGO:00057614.4e-40mitochondrial ribosome
GO:00159354.4e-40small ribosomal subunit
GO:00069154.4e-40apoptosis
KEGG pathway 
InterPro domain[70-356] IPR0193683.3e-63Ribosomal protein S23/S29, mitochondrial
[55-67] IPR0080924.4e-40Ribosomal protein S29, mitochondrial
Orthology groupMCL14195 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS202203-TA
ATGTTTACTAGAAATTTAAGAGTCTTTTTTCGTCGTTATTCACAAACTTGTACCTTCAGGACTTCAGAATTATCACCTGCACAGCACAGTGAAAATCAAATAGGTTTATTTTATACAATTGACAAAAATTTATGCAAGCAACTGTTCGGACATGGTGGATTACCAAAAAGTTACATGAAGCAGACAAAAACGTTCACCGAAACAACTCTGATGGTACGACTGCCTGCTCTTGATGTAATTAACTGCATCAAGAACACGGATTTCGATAAACCAGCCGTCAGATATGTGTTATATGGGGAAAAAGGCGCTGGCAAGTCACTCACTATGGCCCATCTGTTACATTACGCCCATGAACAAGAATTTCTTATCGTTCATGTTCCCTGGGTATCAGAGTGGTTAAGGAGAGTACCGCGTCACAAGGAGATGGCTAACTCACCAACAAAGGAGGGTTTCGTAGACCTTCCATTGGATGCTGCCGCATGGCTTTTACATTTTAAGACACAGAACCAAACGTTAGAGTACACTTGGAGTAAAAGAGAGTCAACATCTCAAGGGGCTCCTCTATTAGAGTTAGTGGAGCTGGGCATCGCCAGAGTAAAATATGCCTGTGACGTTATAGATGCTCTTGTACATGAGATCAAATTGCTGTCAAACAATAAATGCTGTAAGACATTTGTAGCCATAGATGGGTTTAATAGTTTCTTCTATCCCCTAACGAGACTCAGGACACCCACCAAGAGAACCGTGTCACCTGAAGAAGTTAGTCTAACTACATCCTTCTTGACATTGACCAAAAATGACTGGACCAACGGTGTTGTTGTGGTGACAGCCGATCAACTAGCAGTGCCCGAAGATCACCAGGAGAGCTATTTACCGAAATATCTCCTTTATAAGAAGGGTTTTGAACACTTGGACCCGTTTGTGCCTATTGAGGTGGGCAGATATAGTGAACGAGAATTCCTGACTTGTGCCAGTTACTACAGAGACAGGCTTTGGCTTAGAGGACCATCGGAGTTAGAAGATGAGCTCAAGTTCACTAGCGCTTGTAATCCTTACAAGTTTATGGAGCTGTGTGCGCCATTATAA

Protein sequence:

>DPOGS202203-PA
MFTRNLRVFFRRYSQTCTFRTSELSPAQHSENQIGLFYTIDKNLCKQLFGHGGLPKSYMKQTKTFTETTLMVRLPALDVINCIKNTDFDKPAVRYVLYGEKGAGKSLTMAHLLHYAHEQEFLIVHVPWVSEWLRRVPRHKEMANSPTKEGFVDLPLDAAAWLLHFKTQNQTLEYTWSKRESTSQGAPLLELVELGIARVKYACDVIDALVHEIKLLSNNKCCKTFVAIDGFNSFFYPLTRLRTPTKRTVSPEEVSLTTSFLTLTKNDWTNGVVVVTADQLAVPEDHQESYLPKYLLYKKGFEHLDPFVPIEVGRYSEREFLTCASYYRDRLWLRGPSELEDELKFTSACNPYKFMELCAPL-