DPOGS202226 | ||
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Transcript | DPOGS202226-TA | 630 bp |
Protein | DPOGS202226-PA | 209 aa |
Genomic position | DPSCF300149 + 408787-411441 | |
RNAseq coverage | 24x (Rank: top 77%) |
Annotation | ||||
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Heliconius | HMEL011143 | 5e-55 | 48.78% |   |
Bombyx | BGIBMGA013526-TA | 2e-34 | 61.76% |   |
Drosophila | CG17331-PA | 3e-46 | 41.50% |   |
EBI UniRef50 | UniRef50_Q17IE3 | 2e-46 | 42.57% | Proteasome subunit beta type n=10 Tax=Eumetazoa RepID=Q17IE3_AEDAE |
NCBI RefSeq | XP_967917.1 | 6e-55 | 48.96% | PREDICTED: similar to proteasome beta 2 subunit-like protein [Tribolium castaneum] |
NCBI nr blastp | gi|121511942 | 5e-55 | 49.23% | proteasome beta 2 subunit-like protein [Xenopsylla cheopis] |
NCBI nr blastx | gi|121511942 | 4e-52 | 49.23% | proteasome beta 2 subunit-like protein [Xenopsylla cheopis] |
Group | ||||
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Gene Ontology | GO:0051603 | 1.3e-31 | proteolysis involved in cellular protein catabolic process | |
GO:0004298 | 1.3e-31 | threonine-type endopeptidase activity | ||
GO:0005839 | 1.3e-31 | proteasome core complex | ||
KEGG pathway | tca:656283 | 2e-54 |   | |
  | K02734 (PSMB2) | maps-> | Proteasome | |
InterPro domain | [10-187] IPR001353 | 1.3e-31 | Proteasome, subunit alpha/beta | |
Orthology group | MCL11137 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202226-TA
ATGAGTAACACTAGTCTGTTGTTCCAGTGTCTGCTTGGAATAAGATGTAACGATTTCACGATGATCGCCGCGGATCAGACGAACACGCAGGGCGTTCTGGTTATGAGAGATGATGACGACCGTTTGTTGGAGATTGCGGACAAGATAGTGTTGGGTGTGAACGGCACAACTGGAGACATCGTTCAGTTCACACAGTTCGTAGCCAAGAATTTGAGGTTATACGAAATGAGGAACAAGTACGGTCTGGACTCGCGGGCGGTTATACACTTCACGAGGAAGATAATGGCGGACGGATTAAGGGATGGCAATCCATGTTTACTGAACGTCCTGATGGCTGGTTATGATGATGAGGCCGGGAGCCAGCTCTACTCGATGGATTTCCTTGCGTCGTATGTCAGCGCGCCGTTTGCTGTTCATGGTCTTGGCGGCTTTCTGTCTTTGAGTATCCTCGACAATTACTACAAGCCAACCTTAACTGAAATAGAGGCGTACGAAGTGATCAAGCTGTGCGTCTCCGAGATCCAAAATCGACTTTTTCTTAATCTGTCAAACTTCGGGGTGAAATCCGTCACCAAGTGGGGTGTTAAAACACTTCCCACAATCAACCCAACAACATTTTCATCGAAATAA
>DPOGS202226-PA
MSNTSLLFQCLLGIRCNDFTMIAADQTNTQGVLVMRDDDDRLLEIADKIVLGVNGTTGDIVQFTQFVAKNLRLYEMRNKYGLDSRAVIHFTRKIMADGLRDGNPCLLNVLMAGYDDEAGSQLYSMDFLASYVSAPFAVHGLGGFLSLSILDNYYKPTLTEIEAYEVIKLCVSEIQNRLFLNLSNFGVKSVTKWGVKTLPTINPTTFSSK-