DPOGS202263 | ||
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Transcript | DPOGS202263-TA | 969 bp |
Protein | DPOGS202263-PA | 322 aa |
Genomic position | DPSCF300032 - 514197-516060 | |
RNAseq coverage | 78x (Rank: top 65%) |
Annotation | ||||
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Heliconius | HMEL005600 | 3e-165 | 84.29% |   |
Bombyx | BGIBMGA004913-TA | 2e-147 | 78.31% |   |
Drosophila | CG3756-PA | 2e-109 | 58.64% |   |
EBI UniRef50 | UniRef50_B4I197 | 2e-95 | 54.13% | GM18508 n=1 Tax=Drosophila sechellia RepID=B4I197_DROSE |
NCBI RefSeq | XP_001658447.1 | 5e-118 | 62.20% | DNA-directed RNA polymerase [Aedes aegypti] |
NCBI nr blastp | gi|157116377 | 1e-116 | 62.20% | DNA-directed RNA polymerase [Aedes aegypti] |
NCBI nr blastx | gi|157116377 | 4e-113 | 62.20% | DNA-directed RNA polymerase [Aedes aegypti] |
Group | ||||
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Gene Ontology | GO:0003899 | 1.2e-78 | DNA-directed RNA polymerase activity | |
GO:0006351 | 1.2e-78 | transcription, DNA-dependent | ||
GO:0003677 | 3.2e-35 | DNA binding | ||
GO:0046983 | 5e-35 | protein dimerization activity | ||
KEGG pathway | aag:AaeL_AAEL007568 | 1e-117 |   | |
  | K03027 (RPC5) | maps-> | Cytosolic DNA-sensing pathway | |
  |   |   | Purine metabolism | |
  |   |   | Pyrimidine metabolism | |
  |   |   | RNA polymerase | |
InterPro domain | [51-317] IPR011263 | 1.2e-78 | DNA-directed RNA polymerase, RpoA/D/Rpb3-type | |
[37-320] IPR009025 | 3.2e-35 | DNA-directed RNA polymerase, RBP11-like | ||
[77-205] IPR011262 | 5e-35 | DNA-directed RNA polymerase, insert domain | ||
[52-315] IPR011261 | 5.6e-16 | DNA-directed RNA polymerase, dimerisation | ||
Orthology group | MCL14983 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202263-TA
ATGCCGAAACTTGATGAGAAGCCCAGAGTTTTCTTAGAAGAATTTCGAGTTAAGAATGCACCTGACGATTATGGAATGGCAGACGAAAAATGGAATTTTAAGAAATTCACAAAGAAATTTCGTATTGTTATAGTCCGTATGGATAGTACTGAAATGGAATTTGATTTGATTGGCATTCAACCTGCTTTTGCCAATGCTTTTCGAAGGCTCATGTTAAGTGAAGTACCCAGTATGGCAATTGAAAAGGTGATGATAAAAAATAATACATCCATTATACAGGACGAAGTGCTTGCACATAGGTTGGGGTTGATTCCACTAAAGGCAGACCCGCGGTTATTTGAATTTCGTCCTGAAAATGCTGAAGAAGGGACTGAGTTTGACACTTTAGAGTTTTCATTAAAAATAAAATGCACAAATAATAAATATGGACCCAAAGACTCTTTCCGTGCTGAGGACTTGTATGAAAATCATAGCGTATACTCGTCTTCAATTAAATGGCATCCCATTGGAAATCAGGCGTCAATCCACAAGGAAGCTGATGTTGGTCCAGTGGATGATGACATCCTCATATCCAAGATGAGACCCGGCCATGAACTCGATATGCATCTGGTTGTACATATTTTTGACACAACTGCCTCCTACCGCCTACTTCCTGAAGTAACTCTAACCCGTGAAGTGGATGGAAGTGAAGCGACCTTGCTACAGAGCTGCTTTTCACCTGGAGTCATCGGCCTGGATTCTGATGGCAAAGCTTTTGTGAGGGACGCCAGATATGACAGCTGCAGCAGAAATGCTTACAGATATGACTGTATAAAAGACGCCGTAATATTAAGTAGAATACGTGATCATTTTATATTTAATGTGGAGTCAGTGGGTGCCATGCCTCCGAATGTCATATTTGTTGAAGCTGTTAAAATATTAAGAGATAAATGTAAAACATTACTGGATGAATTAAATAATTTTTCTTAA
>DPOGS202263-PA
MPKLDEKPRVFLEEFRVKNAPDDYGMADEKWNFKKFTKKFRIVIVRMDSTEMEFDLIGIQPAFANAFRRLMLSEVPSMAIEKVMIKNNTSIIQDEVLAHRLGLIPLKADPRLFEFRPENAEEGTEFDTLEFSLKIKCTNNKYGPKDSFRAEDLYENHSVYSSSIKWHPIGNQASIHKEADVGPVDDDILISKMRPGHELDMHLVVHIFDTTASYRLLPEVTLTREVDGSEATLLQSCFSPGVIGLDSDGKAFVRDARYDSCSRNAYRYDCIKDAVILSRIRDHFIFNVESVGAMPPNVIFVEAVKILRDKCKTLLDELNNFS-