MonarchBase - Protein-coding gene

DPOGS202263
Transcript	DPOGS202263-TA	969 bp
Protein	DPOGS202263-PA	322 aa
Genomic position	DPSCF300032 - 514197-516060
RNAseq coverage	78x (Rank: top 65%)

Annotation
*Heliconius*	HMEL005600	3e-165	84.29%
*Bombyx*	BGIBMGA004913-TA	2e-147	78.31%
*Drosophila*	CG3756-PA	2e-109	58.64%
EBI UniRef50	UniRef50_B4I197	2e-95	54.13%	GM18508 n=1 Tax=Drosophila sechellia RepID=B4I197_DROSE
NCBI RefSeq	XP_001658447.1	5e-118	62.20%	DNA-directed RNA polymerase [Aedes aegypti]
NCBI nr blastp	gi\|157116377	1e-116	62.20%	DNA-directed RNA polymerase [Aedes aegypti]
NCBI nr blastx	gi\|157116377	4e-113	62.20%	DNA-directed RNA polymerase [Aedes aegypti]

Group
Gene Ontology	GO:0003899	1.2e-78	DNA-directed RNA polymerase activity
	GO:0006351	1.2e-78	transcription, DNA-dependent
	GO:0003677	3.2e-35	DNA binding
	GO:0046983	5e-35	protein dimerization activity
KEGG pathway	aag:AaeL_AAEL007568	1e-117
	K03027 (RPC5)	maps->	Cytosolic DNA-sensing pathway
			Purine metabolism
			Pyrimidine metabolism
			RNA polymerase
InterPro domain	[51-317] IPR011263	1.2e-78	DNA-directed RNA polymerase, RpoA/D/Rpb3-type
	[37-320] IPR009025	3.2e-35	DNA-directed RNA polymerase, RBP11-like
	[77-205] IPR011262	5e-35	DNA-directed RNA polymerase, insert domain
	[52-315] IPR011261	5.6e-16	DNA-directed RNA polymerase, dimerisation
Orthology group	MCL14983		Single-copy universal gene

Nucleotide sequence:

>DPOGS202263-TA
ATGCCGAAACTTGATGAGAAGCCCAGAGTTTTCTTAGAAGAATTTCGAGTTAAGAATGCACCTGACGATTATGGAATGGCAGACGAAAAATGGAATTTTAAGAAATTCACAAAGAAATTTCGTATTGTTATAGTCCGTATGGATAGTACTGAAATGGAATTTGATTTGATTGGCATTCAACCTGCTTTTGCCAATGCTTTTCGAAGGCTCATGTTAAGTGAAGTACCCAGTATGGCAATTGAAAAGGTGATGATAAAAAATAATACATCCATTATACAGGACGAAGTGCTTGCACATAGGTTGGGGTTGATTCCACTAAAGGCAGACCCGCGGTTATTTGAATTTCGTCCTGAAAATGCTGAAGAAGGGACTGAGTTTGACACTTTAGAGTTTTCATTAAAAATAAAATGCACAAATAATAAATATGGACCCAAAGACTCTTTCCGTGCTGAGGACTTGTATGAAAATCATAGCGTATACTCGTCTTCAATTAAATGGCATCCCATTGGAAATCAGGCGTCAATCCACAAGGAAGCTGATGTTGGTCCAGTGGATGATGACATCCTCATATCCAAGATGAGACCCGGCCATGAACTCGATATGCATCTGGTTGTACATATTTTTGACACAACTGCCTCCTACCGCCTACTTCCTGAAGTAACTCTAACCCGTGAAGTGGATGGAAGTGAAGCGACCTTGCTACAGAGCTGCTTTTCACCTGGAGTCATCGGCCTGGATTCTGATGGCAAAGCTTTTGTGAGGGACGCCAGATATGACAGCTGCAGCAGAAATGCTTACAGATATGACTGTATAAAAGACGCCGTAATATTAAGTAGAATACGTGATCATTTTATATTTAATGTGGAGTCAGTGGGTGCCATGCCTCCGAATGTCATATTTGTTGAAGCTGTTAAAATATTAAGAGATAAATGTAAAACATTACTGGATGAATTAAATAATTTTTCTTAA

Protein sequence:

>DPOGS202263-PA
MPKLDEKPRVFLEEFRVKNAPDDYGMADEKWNFKKFTKKFRIVIVRMDSTEMEFDLIGIQPAFANAFRRLMLSEVPSMAIEKVMIKNNTSIIQDEVLAHRLGLIPLKADPRLFEFRPENAEEGTEFDTLEFSLKIKCTNNKYGPKDSFRAEDLYENHSVYSSSIKWHPIGNQASIHKEADVGPVDDDILISKMRPGHELDMHLVVHIFDTTASYRLLPEVTLTREVDGSEATLLQSCFSPGVIGLDSDGKAFVRDARYDSCSRNAYRYDCIKDAVILSRIRDHFIFNVESVGAMPPNVIFVEAVKILRDKCKTLLDELNNFS-

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: