| DPOGS202273 | ||
|---|---|---|
| Transcript | DPOGS202273-TA | 486 bp |
| Protein | DPOGS202273-PA | 161 aa |
| Genomic position | DPSCF300032 - 435740-442789 | |
| RNAseq coverage | 5899x (Rank: top 2%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007639 | 2e-39 | 72.83% | |
| Bombyx | BGIBMGA008405-TA | 4e-09 | 31.48% | |
| Drosophila | Npc2b-PA | 5e-24 | 35.26% | |
| EBI UniRef50 | UniRef50_E0VBV8 | 5e-25 | 39.42% | Ecdysteroid-regulated 16 kDa protein, putative n=1 Tax=Pediculus humanus corporis RepID=E0VBV8_PEDHC |
| NCBI RefSeq | XP_002423602.1 | 1e-25 | 39.42% | Ecdysteroid-regulated 16 kDa protein precursor, putative [Pediculus humanus corporis] |
| NCBI nr blastp | gi|322801381 | 2e-26 | 40.13% | hypothetical protein SINV_01668 [Solenopsis invicta] |
| NCBI nr blastx | gi|322801381 | 3e-26 | 40.13% | hypothetical protein SINV_01668 [Solenopsis invicta] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | phu:Phum_PHUM074050 | 3e-25 | ||
| K13443 (NPC2) | maps-> | Lysosome | ||
| InterPro domain | [24-160] IPR003172 | 5.9e-29 | MD-2-related lipid-recognition | |
| [22-161] IPR014756 | 7.9e-25 | Immunoglobulin E-set | ||
| Orthology group | MCL34436 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202273-TA
ATGAACAAAAAGTTTTTAACCGTTGCGTTACTTTTGGCGGTTTCCATAATAGCCGCTCGGGGTGACGAAACTCCTTCAGAACAATGTTCAGGACAAAACTACGAGGATCTTCGCGAGAGGATCCAGGTTCAACCTTGTGGCATGTTGCGCTGCAAGCTTCGTAAAGGGACAAACACAACCGTTGTGTTTAAATTTAAACCAGATCACGAAATCAAACAGCTGACGAACGATGTTTATGCTGTCATAGCTGGCCTGCCATTGCCGTTTGTTGGCGTGGCAGGGGTCAGTGCGTGCGCACAGATCAAATACGCTGATTCTGGTGAACCGGCGCCGTGCCCTCTGGCTGCTGACAAAGAGTACATATACACCAACTCCTTCCACATAGAGAAGTTCTACCCCCAAGTACCCCTTAGAGTGCATTGGGGTTTGAACGATGGCAACACCGACATTATGTGCTTCGAAATACCAGCTGTTATCGCCAAGTAA
>DPOGS202273-PA
MNKKFLTVALLLAVSIIAARGDETPSEQCSGQNYEDLRERIQVQPCGMLRCKLRKGTNTTVVFKFKPDHEIKQLTNDVYAVIAGLPLPFVGVAGVSACAQIKYADSGEPAPCPLAADKEYIYTNSFHIEKFYPQVPLRVHWGLNDGNTDIMCFEIPAVIAK-