DPOGS202312 | ||
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Transcript | DPOGS202312-TA | 348 bp |
Protein | DPOGS202312-PA | 115 aa |
Genomic position | DPSCF300032 + 367235-367656 | |
RNAseq coverage | 51x (Rank: top 70%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL010592 | 2e-15 | 46.00% |   |
Bombyx | BGIBMGA004983-TA | 6e-16 | 44.30% |   |
Drosophila | CG13510-PA | 4e-12 | 34.62% |   |
EBI UniRef50 | UniRef50_A8CA04 | 1e-10 | 34.78% | Membrane-associated LPS-inducible TNF alpha factor protein-like protein (Fragment) n=1 Tax=Phlebotomus papatasi RepID=A8CA04_PHLPP |
NCBI RefSeq | XP_001865934.1 | 7e-13 | 37.50% | conserved hypothetical protein [Culex quinquefasciatus] |
NCBI nr blastp | gi|170060739 | 2e-11 | 37.50% | conserved hypothetical protein [Culex quinquefasciatus] |
NCBI nr blastx | gi|170060739 | 1e-15 | 35.51% | conserved hypothetical protein [Culex quinquefasciatus] |
Group | ||||
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KEGG pathway |   | |||
InterPro domain | [41-114] IPR006629 | 2.9e-17 | LPS-induced tumor necrosis factor alpha factor | |
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202312-TA
ATGACTACAGTCGCACAAAATTCAGAGCTTCCTCCTCCATATACGGAGAGGGTGGACACCGTGCAGCCGGTAACCAATCAGCCCATTGTACTTCAAACAGTTATAATACCTCTAACATTAAAAAGAACACCCGTTTATGTTAATTGCCCAAACTGCAATGAGAGGATATTGACAACTGTACAACACACGAACACACAAAAGACGCATATGATTGCAGGATTTGTATGTGGTCTAACTCTTTGTTGCATGCTCTGCTGTTTATCTGCAATACCGTACATAATTCCAACCTGCAAGAAAACTGAACATTACTGCCCGAACTGTAAATCTTATATAGGCACGTATTCATAA
>DPOGS202312-PA
MTTVAQNSELPPPYTERVDTVQPVTNQPIVLQTVIIPLTLKRTPVYVNCPNCNERILTTVQHTNTQKTHMIAGFVCGLTLCCMLCCLSAIPYIIPTCKKTEHYCPNCKSYIGTYS-