DPOGS202314 | ||
---|---|---|
Transcript | DPOGS202314-TA | 591 bp |
Protein | DPOGS202314-PA | 196 aa |
Genomic position | DPSCF300032 + 404469-416117 | |
RNAseq coverage | 35x (Rank: top 74%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL007636 | 1e-35 | 50.96% |   |
Bombyx | % |   | ||
Drosophila | % |   | ||
EBI UniRef50 | UniRef50_B0W6I5 | 5e-13 | 33.07% | Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W6I5_CULQU |
NCBI RefSeq | XP_001844319.1 | 1e-13 | 33.07% | conserved hypothetical protein [Culex quinquefasciatus] |
NCBI nr blastp | gi|170032903 | 2e-12 | 33.07% | conserved hypothetical protein [Culex quinquefasciatus] |
NCBI nr blastx | gi|170032903 | 7e-12 | 33.33% | conserved hypothetical protein [Culex quinquefasciatus] |
Group | ||||
---|---|---|---|---|
KEGG pathway |   | |||
InterPro domain | [18-141] IPR003172 | 2e-14 | MD-2-related lipid-recognition | |
[16-145] IPR014756 | 1.1e-13 | Immunoglobulin E-set | ||
Orthology group | MCL33043 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202314-TA
ATGTTGTTTTTGTGCCTGGTCTTTTCCTCAGTTCTAGTAACCGCCCGCGCCGTTTACTTCACGGATTGCGGGTCGGCTTACGATCTGATACACGTGGAAATAGAGGGTTGTGGGTCGCGTCTGCCCTGTTATGTGGCTTTAGGGGACAGGATACCCGTGAGGCTTGATTTCTATGCTGATTTCGAATCCCATTCGCTTGATCAGGATGTGTTTTTGAACATCAATAACGTACAAGCAAGAACGCCAGTTACTCCTGAACAATGTGAATCTGAGATGTGTCCTATAAGAACAGACGCGCTCTCGACTATAACGAGCGTGATGTCAGTACCTACTAGAATGGCGCTGAACCAAAGAGGTTATTTGACATGGCGCGTGTACAATGAAGATGGCAGGCAGGTGTTGTGTTACTTCGTAATGGTACAAACGCAGACATACATTCAGAAGACATTACGCAACCTTCTAGAACAATTGGATTCCGTACGAGATACATCAATGGCATTCACTCGTCCATTAAAAATGAATTTTGTTTTGAATAAGCTTGCAAACAATCAAAAAATAAATCAGACCGCTTTAACTTTTGCCTTGACATAA
>DPOGS202314-PA
MLFLCLVFSSVLVTARAVYFTDCGSAYDLIHVEIEGCGSRLPCYVALGDRIPVRLDFYADFESHSLDQDVFLNINNVQARTPVTPEQCESEMCPIRTDALSTITSVMSVPTRMALNQRGYLTWRVYNEDGRQVLCYFVMVQTQTYIQKTLRNLLEQLDSVRDTSMAFTRPLKMNFVLNKLANNQKINQTALTFALT-