DPOGS202342 | ||
---|---|---|
Transcript | DPOGS202342-TA | 588 bp |
Protein | DPOGS202342-PA | 195 aa |
Genomic position | DPSCF300032 + 883128-883900 | |
RNAseq coverage | 375x (Rank: top 32%) |
Annotation | ||||
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Heliconius | HMEL010036 | 9e-100 | 85.64% |   |
Bombyx | BGIBMGA004838-TA | 6e-93 | 79.90% |   |
Drosophila | mRpS5-PA | 2e-33 | 40.24% |   |
EBI UniRef50 | UniRef50_Q1HQC1 | 7e-91 | 79.90% | Mitochondrial ribosomal protein S5 isoform 2 n=1 Tax=Bombyx mori RepID=Q1HQC1_BOMMO |
NCBI RefSeq | NP_001040341.1 | 2e-91 | 79.90% | mitochondrial ribosomal protein S5 [Bombyx mori] |
NCBI nr blastp | gi|95102564 | 2e-90 | 79.90% | mitochondrial ribosomal protein S5 isoform 2 [Bombyx mori] |
NCBI nr blastx | gi|95102564 | 1e-89 | 80.31% | mitochondrial ribosomal protein S5 isoform 2 [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005840 | 1.4e-60 | ribosome | |
GO:0006412 | 1.4e-60 | translation | ||
GO:0005622 | 1.4e-60 | intracellular | ||
GO:0003735 | 1.4e-60 | structural constituent of ribosome | ||
KEGG pathway | ctp:CTRG_03301 | 1e-11 |   | |
  | K02988 (RP-S5, rpsE) | maps-> | Ribosome | |
InterPro domain | [1-150] IPR000851 | 1.4e-60 | Ribosomal protein S5 | |
[9-89] IPR020568 | 5.2e-22 | Ribosomal protein S5 domain 2-type fold | ||
[5-86] IPR014721 | 8.3e-22 | Ribosomal protein S5 domain 2-type fold, subgroup | ||
[18-87] IPR005324 | 3.6e-18 | Ribosomal protein S5, C-terminal | ||
Orthology group | MCL12732 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202342-TA
ATGAACTTTGAAACTTACAATGGGCACACAGTTTTCCACGACTTCTTTACTGCTTTCGGTAAAACCAAAATATATGTACAGAAGAAAAATGAAGGTTACGGGCTGGTCTGCCACAGGGCTATAAGAGAAATCTGTCAAGCTATTGGCATTAAGGATCTGAGAGCCAAGGTGGAGGGATCCAACAATCTGCAACATATTGTAAAAGCCTTCTTTATAGGATTGTTGCAACAGAGAACCCATCAGCAGCTCGCCGAAGAAAAGAAACTTCATTTAGTAGAGTTTAGACAAGAGAATTCTTTGTACCCTACCGTGGTTGCCAGCCCTTCGTACGTCCGTACAAAAGACGAAATACCTAAGGACGAGACACTAGATTTTATAAATTACGTTATGAATGATCGAGTCATTCTAAAGAGGAAGAAATTCCCTCGTTTCTATGAAACGATGCCACACTATGAGATATATCTGAAGAAGTACGAGAAATATAGGAATCACGAAAGAATAAGACTTAATCTGAAAACGGAATATGGGGAGGTGAAGAGTTTCCTGACCGACAAATACCCGGAAGAGAAGAAGGATGAAGAAGCTTGA
>DPOGS202342-PA
MNFETYNGHTVFHDFFTAFGKTKIYVQKKNEGYGLVCHRAIREICQAIGIKDLRAKVEGSNNLQHIVKAFFIGLLQQRTHQQLAEEKKLHLVEFRQENSLYPTVVASPSYVRTKDEIPKDETLDFINYVMNDRVILKRKKFPRFYETMPHYEIYLKKYEKYRNHERIRLNLKTEYGEVKSFLTDKYPEEKKDEEA-