DPOGS202408 | ||
---|---|---|
Transcript | DPOGS202408-TA | 306 bp |
Protein | DPOGS202408-PA | 101 aa |
Genomic position | DPSCF300233 - 49498-50372 | |
RNAseq coverage | 26x (Rank: top 77%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | % |   | ||
Bombyx | BGIBMGA003303-TA | 4e-13 | 62.75% |   |
Drosophila | % |   | ||
EBI UniRef50 | % | |||
NCBI RefSeq | % | |||
NCBI nr blastp | % | |||
NCBI nr blastx | % |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0043395 | 4.9e-07 | heparan sulfate proteoglycan binding | |
GO:0016020 | 4.9e-07 | membrane | ||
GO:0005578 | 4.9e-07 | proteinaceous extracellular matrix | ||
KEGG pathway |   | |||
InterPro domain | [9-79] IPR001863 | 4.9e-07 | Glypican | |
Orthology group | MCL44391 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202408-TA
ATGTTACGTTTCTTAGATGCCGGCGAGCTTTGTCTCAACAAGGGTTGCTGCGGTGCTGGTGCGCGATCTCGTCTGAGCACTCAGGCGAGGACACAGCTTGAAGATGCACTACGCAGTGAACTGAACAAACTAGCACAAATACTGTCCAACAGAGCCAAACGATTTGATGCAACCAACTCATTTGATGTAACACAGAAAACATATAGTAATTCATTAAATAAAATATTCATAAACGAGCTCAAACCGCACACGCTTCCGTGGGCGTGGACCGTGGGCGTCCGTCTGAGACCAGATTCTAGTTTCTGA
>DPOGS202408-PA
MLRFLDAGELCLNKGCCGAGARSRLSTQARTQLEDALRSELNKLAQILSNRAKRFDATNSFDVTQKTYSNSLNKIFINELKPHTLPWAWTVGVRLRPDSSF-