DPOGS202469 | ||
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Transcript | DPOGS202469-TA | 198 bp |
Protein | DPOGS202469-PA | 65 aa |
Genomic position | DPSCF300174 + 412949-413326 | |
RNAseq coverage | 0x (Rank: top 96%) |
Annotation | ||||
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Heliconius | HMEL003604 | 2e-07 | 52.08% |   |
Bombyx | BGIBMGA010883-TA | 2e-11 | 78.38% |   |
Drosophila | His2A:CG33850-PA | 2e-07 | 52.08% |   |
EBI UniRef50 | UniRef50_P40280 | 1e-06 | 65.79% | Histone H2A n=159 Tax=Eukaryota RepID=H2A_MAIZE |
NCBI RefSeq | NP_001153667.1 | 8e-10 | 78.38% | histone H2AX-like protein [Bombyx mori] |
NCBI nr blastp | gi|237648980 | 2e-08 | 78.38% | histone H2AX-like protein [Bombyx mori] |
NCBI nr blastx | gi|237648980 | 8e-11 | 69.23% | histone H2AX-like protein [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0005634 | 4.1e-09 | nucleus | |
GO:0003677 | 4.1e-09 | DNA binding | ||
GO:0006334 | 4.1e-09 | nucleosome assembly | ||
GO:0000786 | 4.1e-09 | nucleosome | ||
KEGG pathway | sbi:SORBI_02g030950 | 1e-07 |   | |
  | K11251 (H2A) | maps-> | Systemic lupus erythematosus | |
InterPro domain | [13-25] IPR002119 | 4.1e-09 | Histone H2A | |
[17-51] IPR009072 | 5.7e-08 | Histone-fold | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202469-TA
ATGGGATCTCTGGTGTTTGGTCGTATTATAGATAAAGTTGATTTGGGCAACGATGAAGAGCTAGATAGAATGCTGAGTGGTGTGACTATATCACATGGCGGAGTGATGCCGAGGATTGAACCAGAATTACTACCCAAGAAAATTGCCATTAAAAGCCACAGTACAGATACATCAATGATGGCGTCACAGGAGTACTGA
>DPOGS202469-PA
MGSLVFGRIIDKVDLGNDEELDRMLSGVTISHGGVMPRIEPELLPKKIAIKSHSTDTSMMASQEY-