DPOGS202540 | ||
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Transcript | DPOGS202540-TA | 543 bp |
Protein | DPOGS202540-PA | 180 aa |
Genomic position | DPSCF300131 + 669014-669964 | |
RNAseq coverage | 684x (Rank: top 19%) |
Annotation | ||||
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Heliconius | HMEL002970 | 3e-99 | 93.89% |   |
Bombyx | BGIBMGA000127-TA | 2e-96 | 89.94% |   |
Drosophila | CG7006-PA | 6e-74 | 67.60% |   |
EBI UniRef50 | UniRef50_Q503P2 | 6e-75 | 69.27% | 60S ribosome subunit biogenesis protein NIP7 homolog n=48 Tax=Eukaryota RepID=NIP7_DANRE |
NCBI RefSeq | XP_971558.1 | 2e-82 | 76.67% | PREDICTED: similar to nuclear import 7 homolog [Tribolium castaneum] |
NCBI nr blastp | gi|91095249 | 4e-81 | 76.67% | PREDICTED: similar to nuclear import 7 homolog [Tribolium castaneum] |
NCBI nr blastx | gi|91095249 | 4e-78 | 76.67% | PREDICTED: similar to nuclear import 7 homolog [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0005634 | 1.2e-115 | nucleus | |
GO:0042255 | 1.2e-115 | ribosome assembly | ||
GO:0003723 | 3.8e-13 | RNA binding | ||
KEGG pathway |   | |||
InterPro domain | [1-180] IPR016686 | 1.2e-115 | Ribosome biogenesis factor, NIP7 | |
[95-170] IPR015947 | 5.3e-30 | PUA-like domain | ||
[95-174] IPR002478 | 3.8e-13 | Pseudouridine synthase/archaeosine transglycosylase | ||
[40-146] IPR005155 | 1.9e-08 | Ribosome biogenesis factor NIP7-like | ||
Orthology group | MCL15365 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202540-TA
ATGAAGGTATTATCAGAGGACCGCACGAAGAAACTGTTCGAAAAATTGACAAAATATATCGGAGTAAACGTTAAGCTTCTAATAGACCGACCGGACGGCACATACTGCTTCAGAGAAAAGAAAGACAGGGTGTATTATATATCTGAGAAATTGTTACAACTAGCACAAACTGTGAAACCTGAACATCTGATATCCGCTGGTACATGTTTTGGTAAATTCACTAAAACAAATAAGTTCCGGTTGCATATAACGGCGTTGACATACATAGCGCCATATGCTACATACAAGATATGGGTTAAACCATCGGCAGAACAGCAGTTTTTGTACGGACATCATGTTATTAAAAGTGGACTTGGCAGAATAACGGAAAACACACCTAAACACCAAGGAGTTGTTATCAACACAATGTCGGATATACCAATAGGTTTTGGAGTCGCAGCTCGATCAACCACAGAATGTAGACACGCAGATCCCTTAGCAACAATCGCCTTCCACCAGGCCGACATCGGTGAATACATACGATCGGAAGATACTTTAGTTTGA
>DPOGS202540-PA
MKVLSEDRTKKLFEKLTKYIGVNVKLLIDRPDGTYCFREKKDRVYYISEKLLQLAQTVKPEHLISAGTCFGKFTKTNKFRLHITALTYIAPYATYKIWVKPSAEQQFLYGHHVIKSGLGRITENTPKHQGVVINTMSDIPIGFGVAARSTTECRHADPLATIAFHQADIGEYIRSEDTLV-