Monarch geneset OGS2.0

DPOGS202540
TranscriptDPOGS202540-TA543 bp
ProteinDPOGS202540-PA180 aa
Genomic positionDPSCF300131 + 669014-669964
RNAseq coverage684x (Rank: top 19%)
Annotation
HeliconiusHMEL0029703e-9993.89% 
BombyxBGIBMGA000127-TA2e-9689.94% 
DrosophilaCG7006-PA6e-7467.60% 
EBI UniRef50UniRef50_Q503P26e-7569.27%60S ribosome subunit biogenesis protein NIP7 homolog n=48 Tax=Eukaryota RepID=NIP7_DANRE
NCBI RefSeqXP_971558.12e-8276.67%PREDICTED: similar to nuclear import 7 homolog [Tribolium castaneum]
NCBI nr blastpgi|910952494e-8176.67%PREDICTED: similar to nuclear import 7 homolog [Tribolium castaneum]
NCBI nr blastxgi|910952494e-7876.67%PREDICTED: similar to nuclear import 7 homolog [Tribolium castaneum]
Group
Gene OntologyGO:00056341.2e-115nucleus
GO:00422551.2e-115ribosome assembly
GO:00037233.8e-13RNA binding
KEGG pathway 
InterPro domain[1-180] IPR0166861.2e-115Ribosome biogenesis factor, NIP7
[95-170] IPR0159475.3e-30PUA-like domain
[95-174] IPR0024783.8e-13Pseudouridine synthase/archaeosine transglycosylase
[40-146] IPR0051551.9e-08Ribosome biogenesis factor NIP7-like
Orthology groupMCL15365 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS202540-TA
ATGAAGGTATTATCAGAGGACCGCACGAAGAAACTGTTCGAAAAATTGACAAAATATATCGGAGTAAACGTTAAGCTTCTAATAGACCGACCGGACGGCACATACTGCTTCAGAGAAAAGAAAGACAGGGTGTATTATATATCTGAGAAATTGTTACAACTAGCACAAACTGTGAAACCTGAACATCTGATATCCGCTGGTACATGTTTTGGTAAATTCACTAAAACAAATAAGTTCCGGTTGCATATAACGGCGTTGACATACATAGCGCCATATGCTACATACAAGATATGGGTTAAACCATCGGCAGAACAGCAGTTTTTGTACGGACATCATGTTATTAAAAGTGGACTTGGCAGAATAACGGAAAACACACCTAAACACCAAGGAGTTGTTATCAACACAATGTCGGATATACCAATAGGTTTTGGAGTCGCAGCTCGATCAACCACAGAATGTAGACACGCAGATCCCTTAGCAACAATCGCCTTCCACCAGGCCGACATCGGTGAATACATACGATCGGAAGATACTTTAGTTTGA

Protein sequence:

>DPOGS202540-PA
MKVLSEDRTKKLFEKLTKYIGVNVKLLIDRPDGTYCFREKKDRVYYISEKLLQLAQTVKPEHLISAGTCFGKFTKTNKFRLHITALTYIAPYATYKIWVKPSAEQQFLYGHHVIKSGLGRITENTPKHQGVVINTMSDIPIGFGVAARSTTECRHADPLATIAFHQADIGEYIRSEDTLV-