DPOGS202565 | ||
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Transcript | DPOGS202565-TA | 606 bp |
Protein | DPOGS202565-PA | 201 aa |
Genomic position | DPSCF300355 - 24326-25954 | |
RNAseq coverage | 0x (Rank: top 96%) |
Annotation | ||||
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Heliconius | HMEL021619 | 4e-31 | 68.52% |   |
Bombyx | BGIBMGA008390-TA | 6e-73 | 88.46% |   |
Drosophila | tx-PA | 1e-20 | 67.90% |   |
EBI UniRef50 | UniRef50_D2A305 | 3e-24 | 47.95% | Putative uncharacterized protein GLEAN_07594 n=2 Tax=Tribolium castaneum RepID=D2A305_TRICA |
NCBI RefSeq | XP_973186.1 | 6e-25 | 47.95% | PREDICTED: similar to Helix-loop-helix protein delilah [Tribolium castaneum] |
NCBI nr blastp | gi|91080559 | 1e-23 | 47.95% | PREDICTED: similar to Helix-loop-helix protein delilah [Tribolium castaneum] |
NCBI nr blastx | gi|270005529 | 1e-23 | 44.83% | hypothetical protein TcasGA2_TC007598 [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0005634 | 2.3e-18 | nucleus | |
GO:0006355 | 2.3e-18 | regulation of transcription, DNA-dependent | ||
KEGG pathway |   | |||
InterPro domain | [32-95] IPR011598 | 2.3e-18 | Helix-loop-helix DNA-binding | |
[32-89] IPR001092 | 1e-15 | Helix-loop-helix DNA-binding domain | ||
Orthology group | MCL21739 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202565-TA
ATGCCCGATCACGACAAGTACCAGCTGCGTCCGCGGGCGGCGCGCACTCGAGAGAGTCGCGCGCGTCGGGCCCCGCAACCTCTCAGCAAGTATCGCAGGAAAACTGCTAACGCACGTGAAAGATCCCGGATGAGAGAGATAAATAATGCCTTCGAAGCCTTGCGAAGAGCGGTCCCAGCTTCAGAGATAACCGGCAATCCTGTGCCATGCGAGAAGCTCACTAAAATAACGACGTTGAGGCTCGCCATGAGGTACATCACCGCATTATCTACCGCGCTGAGAGACACCAGTCCCGAGTCGGAGTCCGGCTCCAGACCTGACCGCTGGCCATCTCCGCTGTGTTCGGAGCTGTCTGAGTTCTCCACAGAGCAGGAGACTCCATCAGAGTTCGCGGAGGACTCCCTGTCGCCCTTCGACTCTTTCTTCGCGGAATTCGACTATGAGTACATAGACAGGACATTTACATACATAGAAGTTAGAACGGAAATGCCGAAACCAATATGTAAATACTGTCAGATTTATAGCCGCCATGGCTATATGATGTCCACCTCCTTGTTCATTCATCCTGACAATACTATCGCGCCATTAAGCGTTAGAAAAAAATAG
>DPOGS202565-PA
MPDHDKYQLRPRAARTRESRARRAPQPLSKYRRKTANARERSRMREINNAFEALRRAVPASEITGNPVPCEKLTKITTLRLAMRYITALSTALRDTSPESESGSRPDRWPSPLCSELSEFSTEQETPSEFAEDSLSPFDSFFAEFDYEYIDRTFTYIEVRTEMPKPICKYCQIYSRHGYMMSTSLFIHPDNTIAPLSVRKK-