| DPOGS202566 | ||
|---|---|---|
| Transcript | DPOGS202566-TA | 339 bp |
| Protein | DPOGS202566-PA | 112 aa |
| Genomic position | DPSCF300355 - 23188-23526 | |
| RNAseq coverage | 51x (Rank: top 70%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL021619 | 2e-31 | 68.52% | |
| Bombyx | BGIBMGA008390-TA | 3e-50 | 87.61% | |
| Drosophila | tx-PA | 1e-11 | 61.67% | |
| EBI UniRef50 | UniRef50_D2A305 | 1e-10 | 46.34% | Putative uncharacterized protein GLEAN_07594 n=2 Tax=Tribolium castaneum RepID=D2A305_TRICA |
| NCBI RefSeq | XP_973186.1 | 2e-11 | 46.34% | PREDICTED: similar to Helix-loop-helix protein delilah [Tribolium castaneum] |
| NCBI nr blastp | gi|270005529 | 2e-10 | 59.38% | hypothetical protein TcasGA2_TC007598 [Tribolium castaneum] |
| NCBI nr blastx | gi|270005529 | 2e-10 | 39.39% | hypothetical protein TcasGA2_TC007598 [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 3.3e-11 | nucleus | |
| GO:0006355 | 3.3e-11 | regulation of transcription, DNA-dependent | ||
| KEGG pathway | ||||
| InterPro domain | [1-51] IPR011598 | 3.3e-11 | Helix-loop-helix DNA-binding | |
| [1-46] IPR001092 | 2.8e-09 | Helix-loop-helix DNA-binding domain | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202566-TA
ATGAGAGAGATAAATAATGCCTTCGAAGCCTTGCGAAGAGCGGTCCCAGCTTCAGAGATAACCGGCAATCCTGTGCCATGCGAGAAGCTCACTAAAATAACGACGTTGAGGCTCGCCATGAGGTACATCACCGCATTATCTACCGCGCTGAGAGACACCAGTCCCGAGTCGGAGTCCGGCTCCAGACCTGACCGCTGGCCATCTCCGCTGTGTTCGGAGCTGTCTGAGTTCTCCACAGAGCAGGAGACTCCATCAGAGTTCGCGGAGGACTCCCTGTCGCCCTTCGACTCTTTCTTCGCGGAATTCGACTATGAGTACATAGACAGGACATTTACGTGA
>DPOGS202566-PA
MREINNAFEALRRAVPASEITGNPVPCEKLTKITTLRLAMRYITALSTALRDTSPESESGSRPDRWPSPLCSELSEFSTEQETPSEFAEDSLSPFDSFFAEFDYEYIDRTFT-