| DPOGS202652 | ||
|---|---|---|
| Transcript | DPOGS202652-TA | 330 bp |
| Protein | DPOGS202652-PA | 109 aa |
| Genomic position | DPSCF300039 - 169806-170135 | |
| RNAseq coverage | 23x (Rank: top 78%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002223 | 3e-41 | 73.08% | |
| Bombyx | BGIBMGA000851-TA | 2e-38 | 66.35% | |
| Drosophila | CG10092-PA | 4e-26 | 50.48% | |
| EBI UniRef50 | UniRef50_B0WXM2 | 2e-28 | 54.81% | Arginyl-tRNA synthetase n=3 Tax=Culicinae RepID=B0WXM2_CULQU |
| NCBI RefSeq | XP_001862144.1 | 3e-29 | 54.81% | arginyl-tRNA synthetase [Culex quinquefasciatus] |
| NCBI nr blastp | gi|170052266 | 9e-28 | 54.81% | arginyl-tRNA synthetase [Culex quinquefasciatus] |
| NCBI nr blastx | gi|170052266 | 1e-26 | 54.81% | arginyl-tRNA synthetase [Culex quinquefasciatus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0004814 | 1.1e-27 | arginine-tRNA ligase activity | |
| GO:0005524 | 1.1e-27 | ATP binding | ||
| GO:0006420 | 1.1e-27 | arginyl-tRNA aminoacylation | ||
| GO:0005737 | 1.1e-27 | cytoplasm | ||
| GO:0000166 | 1.8e-20 | nucleotide binding | ||
| KEGG pathway | cqu:CpipJ_CPIJ011931 | 1e-28 | ||
| K01887 (RARS, argS) | maps-> | Aminoacyl-tRNA biosynthesis | ||
| InterPro domain | [18-104] IPR001278 | 1.1e-27 | Arginyl-tRNA synthetase, class Ia | |
| [15-104] IPR014729 | 1e-24 | Rossmann-like alpha/beta/alpha sandwich fold | ||
| [15-104] IPR015945 | 1.8e-20 | Arginyl-tRNA synthetase, class Ia, core | ||
| Orthology group | MCL14312 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202652-TA
ATGACATCAGATAGCACAGGAAAAAAAATAGCCAAAGTTAATGACAGGAATGTGACAGTTTTAAAAAGCGATGATTCAACATTATACCTCTCCAGGGATATAGCCGCGCTCCTGGATAGGTGTGAAAGATATAAATTTGACAAAATGTTGTATGTTGTTGACAATTCACAGACGGACCATTTCGTAGCAGTTTTTGATATTGTCAGTAAGTTAAATAAGAGCGCTGCAGAGTGCTCTAAACATATTAAGTTTGGTAGAATTAAAGGAATGAGCACCAGAAGTGGAAATGTTATATTTCTCAATGACATATTGTACTTATCAATGATCTGA
>DPOGS202652-PA
MTSDSTGKKIAKVNDRNVTVLKSDDSTLYLSRDIAALLDRCERYKFDKMLYVVDNSQTDHFVAVFDIVSKLNKSAAECSKHIKFGRIKGMSTRSGNVIFLNDILYLSMI-