Monarch geneset OGS2.0

DPOGS202662
TranscriptDPOGS202662-TA1443 bp
ProteinDPOGS202662-PA480 aa
Genomic positionDPSCF300039 + 115766-122287
RNAseq coverage88x (Rank: top 63%)
Annotation
HeliconiusHMEL0022304e-17179.08% 
BombyxBGIBMGA001290-TA2e-17179.07% 
DrosophilaTraf6-PA1e-7936.34% 
EBI UniRef50UniRef50_E9JEJ34e-16979.07%TRAF6 n=1 Tax=Bombyx mori RepID=E9JEJ3_BOMMO
NCBI RefSeqXP_972955.12e-9942.89%PREDICTED: similar to AGAP003004-PA [Tribolium castaneum]
NCBI nr blastpgi|3796988881e-16879.07%TRAF6 [Bombyx mori]
NCBI nr blastxgi|3796988888e-16579.07%TRAF6 [Bombyx mori]
Group
Gene OntologyGO:00055152.5e-27protein binding
GO:00082703.2e-09zinc ion binding
KEGG pathwaytca:6617166e-99 
 K03175 (TRAF6)maps-> Ubiquitin mediated proteolysis
    Leishmaniasis
    Toll-like receptor signaling pathway
    MAPK signaling pathway
    RIG-I-like receptor signaling pathway
    Small cell lung cancer
    Pathways in cancer
    Endocytosis
    Chagas disease
    Neurotrophin signaling pathway
    NOD-like receptor signaling pathway
InterPro domain[260-408] IPR0133222.2e-35TRAF-type
[267-408] IPR0089742.5e-27TRAF-like
[29-110] IPR0130832.5e-15Zinc finger, RING/FYVE/PHD-type
[294-408] IPR0020832.2e-11MATH
[36-71] IPR0189572e-10Zinc finger, C3HC4 RING-type
[36-73] IPR0018413.2e-09Zinc finger, RING-type
Orthology groupMCL16171 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS202662-TA
ATGGATCCCAACAAAATTAAAAATGCTTCGGAAGGTATAGCTCCTATGGGTATAACAGCCCTTAATGAAACTATTCTCACCAATCAGCCAGAGTCAAGGTATGAATGTCCTGTGTGTCTGAACTGGCTTAGAGATCCTGTCATCACGACATGTGGTCACAAATTCTGTAAATCATGCATCACTTCCTGGTTACAAAATAGTGGTCATTGCCCAATTGACAATATAAATCTCAGTATGAAAGTTGACATATTCCCTGACAATTACACTAAAAGGGAAATTCAAGAGCAAAGAATGTCGTGTCCTTTTGCCACAAAAGGCTGTGCAGTGAAAGTGACTCCATTGGACTTGGACTCTCACATAGCGAGTTGTGAGTTCAATCAACCCGAAGCTTCGTCCCAACCTCAAGTACAGGTGCCATGTACATTCAGTGCTCTCGGCTGCAAGGAGACATTCGAAACACAGGAAGATATGAATGACCATTTACATAGTGATGTACAGACTCACATGAGTCTCCTAATGAACGCCTATTCCAAGTTACAAATCGACAATGACATATCGAATGCCAGTATGGATGCGAAGGAGCAAGAAGCTATGCTTCTATGGGAACCGTCCAAAGATGGCGCTGCGAGTACATCGCCACCAGTGAACAATACTAGCGCTCTTATAAGGGCGCTGTATGAAAGGGTTGTGGTCCTTGAACAGAGGAATCGTGAACTGGATATAGTCATAGCCAACATTTCAAAGCAAATGTCAGCATTTGCTGTAGCCAAAATGAAGCAAAACAACGACTTAATACTCCGTTACTGTATGGGAAATTATATTTGGAAGATAGACAATTTTAAAGCCAGGTTAGAAGCAATGCAAAAGGATCATTTTAAAATGTTGTACAGCCCTGGCTTCTATACCTCGCCTAATGGTTACAGATTCTGTGTCCGTCTCAACATATCACCGCAGAACCCACAGTGTTTTGCTCTTCATGTGCATTTAATGAAAACTGAATACGATGACTGTTTGGAATGGCCTTTCAATGGGAGGATATCCTTCGCTATGATCAATCAATACAACCCGGAGCTCACCCAGAGGGATACAATGATGTCCAACTCAACTTTGATAGCATTCAGGAAGCCGTCCACGGAGATATGTGTCAGGGGTTTTGGTTACACCGAATATGCAGTGGTTAATGATGTTGCCAGGAACGGCTTTGTTAAGGATGACACGCTCATTAGCGACGAGCTGGAGTCCCCCGGGAAGTGCATCATGTCGCCCCCACAGCTGGGCGTGGGAGACGACGGCGGGGACGCCCGCGAGGAACTAAAACTGCTCGAGCTTAGCTCCTCCGGCTCTGAGAAGCGACCTGGTACACCGTACAAAACATACATTGTGCCGTCTCATTCCAAAACCTTTGTATATAACGATACTGATATATTTAATAATAAGACATAA

Protein sequence:

>DPOGS202662-PA
MDPNKIKNASEGIAPMGITALNETILTNQPESRYECPVCLNWLRDPVITTCGHKFCKSCITSWLQNSGHCPIDNINLSMKVDIFPDNYTKREIQEQRMSCPFATKGCAVKVTPLDLDSHIASCEFNQPEASSQPQVQVPCTFSALGCKETFETQEDMNDHLHSDVQTHMSLLMNAYSKLQIDNDISNASMDAKEQEAMLLWEPSKDGAASTSPPVNNTSALIRALYERVVVLEQRNRELDIVIANISKQMSAFAVAKMKQNNDLILRYCMGNYIWKIDNFKARLEAMQKDHFKMLYSPGFYTSPNGYRFCVRLNISPQNPQCFALHVHLMKTEYDDCLEWPFNGRISFAMINQYNPELTQRDTMMSNSTLIAFRKPSTEICVRGFGYTEYAVVNDVARNGFVKDDTLISDELESPGKCIMSPPQLGVGDDGGDAREELKLLELSSSGSEKRPGTPYKTYIVPSHSKTFVYNDTDIFNNKT-