| DPOGS202722 | ||
|---|---|---|
| Transcript | DPOGS202722-TA | 861 bp |
| Protein | DPOGS202722-PA | 286 aa |
| Genomic position | DPSCF300272 + 184809-186917 | |
| RNAseq coverage | 207x (Rank: top 46%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007890 | 6e-137 | 81.32% | |
| Bombyx | BGIBMGA008433-TA | 4e-147 | 88.97% | |
| Drosophila | Gmd-PA | 1e-121 | 67.48% | |
| EBI UniRef50 | UniRef50_F1KSH1 | 3e-113 | 66.08% | GDP-mannose 4,6 dehydratase 1 n=3 Tax=Opisthokonta RepID=F1KSH1_ASCSU |
| NCBI RefSeq | XP_001863206.1 | 4e-128 | 72.73% | GDP-mannose 4,6 dehydratase [Culex quinquefasciatus] |
| NCBI nr blastp | gi|170054607 | 7e-127 | 72.73% | GDP-mannose 4,6 dehydratase [Culex quinquefasciatus] |
| NCBI nr blastx | gi|170054607 | 7e-123 | 72.73% | GDP-mannose 4,6 dehydratase [Culex quinquefasciatus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0019673 | 1.5e-158 | GDP-mannose metabolic process | |
| GO:0005622 | 1.5e-158 | intracellular | ||
| GO:0008446 | 1.5e-158 | GDP-mannose 4,6-dehydratase activity | ||
| GO:0044237 | 6.3e-50 | cellular metabolic process | ||
| GO:0003824 | 6.3e-50 | catalytic activity | ||
| GO:0050662 | 6.3e-50 | coenzyme binding | ||
| GO:0005488 | 2e-32 | binding | ||
| KEGG pathway | cqu:CpipJ_CPIJ012919 | 1e-127 | ||
| K01711 (E4.2.1.47, gmd) | maps-> | Amino sugar and nucleotide sugar metabolism | ||
| Fructose and mannose metabolism | ||||
| InterPro domain | [15-285] IPR006368 | 1.5e-158 | GDP-mannose 4,6-dehydratase | |
| [15-188] IPR001509 | 6.3e-50 | NAD-dependent epimerase/dehydratase | ||
| [14-126] IPR016040 | 2e-32 | NAD(P)-binding domain | ||
| Orthology group | MCL12996 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202722-TA
ATGGTTTCTCGTCAAACAATACCTCGTTTACAATACCTGATAAGACCAAAGGAAATATATAACTTGGGGGCTCAATCCCACGTTAAGGTGTCGTTCGAGTTGAGTGAATATACAGCTCAAGTAGACGCTCTGGGTACCCTTAGACTGCTGGAAGCGGTGCGGACTGCTGGATTAGAGAAGGAAACTAGAATATACCAGGCTTCCACCTCGGAACTATACGGGAAAGTATTAGAAGTTCCCCAGAATGAGAAAACGCCGTTCTATCCAAGGTCGCCTTATGCGTGTGCTAAGCTCTACGGTCACTGGATAGTAGTGAACTATAGGGAGGCGTACGGGATGTTCGCGTGTAACGGCTTACTCTTCAACCATGAGAGCCCGAGGCGGGGGGAGAACTTCGTAACGAGAAAAATAACCCGCGGAGTGGCCAAGATACAGCTGGGATTGATGTCGCATCTGGAAATGGGCAATTTGGATAGCAAAAGAGATTGGGGACATGCCAAGGATTATGTAGAGGCTATGTGGCTGATACTGCAGCAGGATGAGCCGGAAGATTTCGTGGTTGCCTCCGGCGAGGCTCACAGTGTGAGGGAATTCATAGAGAAGGCTTTCGCGTGTGTGGGGAGAGGGGTGGTGTGGAGGGGGGAGGGGGTGCACGAAACTGGTCACGATAAACATACGGACCAACTACTCGTTAAGGTCAACCCAAAATATTTCAGACCCACGGAAGTGGATCTTCTTCTAGGTGACGCGTCAAAAGCCAAACAGAAATTAGGTTGGACCAACAAAACCACCTTCGAAGAGCTGGTCAAAGATATGGTGGAGGCCGACCTTGAACTCATGAAGAAAAACCCCGAGGCATAA
>DPOGS202722-PA
MVSRQTIPRLQYLIRPKEIYNLGAQSHVKVSFELSEYTAQVDALGTLRLLEAVRTAGLEKETRIYQASTSELYGKVLEVPQNEKTPFYPRSPYACAKLYGHWIVVNYREAYGMFACNGLLFNHESPRRGENFVTRKITRGVAKIQLGLMSHLEMGNLDSKRDWGHAKDYVEAMWLILQQDEPEDFVVASGEAHSVREFIEKAFACVGRGVVWRGEGVHETGHDKHTDQLLVKVNPKYFRPTEVDLLLGDASKAKQKLGWTNKTTFEELVKDMVEADLELMKKNPEA-