Monarch geneset OGS2.0

DPOGS202832
TranscriptDPOGS202832-TA918 bp
ProteinDPOGS202832-PA305 aa
Genomic positionDPSCF300018 + 723593-726686
RNAseq coverage22x (Rank: top 78%)
Annotation
HeliconiusHMEL0092781e-8779.79% 
BombyxBGIBMGA010504-TA1e-7063.78% 
DrosophilaTsp33B-PA8e-0622.41% 
EBI UniRef50UniRef50_UPI00022CAA303e-3028.67%UPI00022CAA30 related cluster n=3 Tax=unknown RepID=UPI00022CAA30
NCBI RefSeqXP_001120816.15e-2829.28%PREDICTED: similar to T14G10.6 [Apis mellifera]
NCBI nr blastpgi|3838663585e-3229.57%PREDICTED: peripherin-2-like [Megachile rotundata]
NCBI nr blastxgi|3838663583e-3129.67%PREDICTED: peripherin-2-like [Megachile rotundata]
Group
Gene OntologyGO:00160219e-10integral to membrane
KEGG pathwayame:7249162e-27 
 K07607 (PRPH)maps-> Amyotrophic lateral sclerosis (ALS)
InterPro domain[105-277] IPR0184999e-10Tetraspanin
[125-227] IPR0089524e-06Tetraspanin, EC2 domain
Orthology groupMCL25744 Lepidoptera specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS202832-TA
ATGGCCTGGCAAGTCAGGTTCACTAGAGATGGCAGACAGCGCCTGGCCGGTGTACTCCGAGCGCTGCTGATAGCGCAACTGGCTATTTCATTAGTCATGGTTATATTTTGTTATAACGTGACTGTCAAAGTAATGTCGCTGTTGAAAAATATTCATAAGGTAACAGTAATGCTGTTCTACGCCCTTCTACTACTTCATGCGTATTGCATGAAACTTCACTACACGAGCGGTTTCCGCCTCATCTCTTGGCTACTCCGATGTCCTCACTGGCCTCGAGCTGCGCCAGTCACCCGTCTTTGGCTCATCAGCGGTTGCTTAGTCGCTCTCAACGGCCTGCTGGTTCATGCTGCTTGTAAAAGCACACTTAAAGCATTAATGAAAGAATTGTCGTCGTCACTTCGAATCGGTATATCACACTACCTGTCGGAGCCGACGTGGAAACGTATCATGGACACCATGCAGGTAGAACTAAACTGCTGCGGCGTTGAGAGCCCGAGCGACTGGCACGAGATCCCCTGGATTAATATGGACTTCCTCAATGAAGATTCAGAACTTGTTATGAAGTTATCAGGAACTGATGGTAAGGCCCTGCCGCCGGTGTCTCCTTACTCTTGCTGTTCGCCGCATGTGCTGGCAGCGTGCTGTCACGACCCTTTACAGCAGTTCGAGGACTCCTGGTGGGGCAGCGCTGCGGGTGCTACTCTAAGCGCTCGGTCGTGCCGTGACGCGGTGGGCGCTCCGCTGGCTCGCGCTGCACTCGCCATACACACATTGAGCGCTCTTGCCCTTGTTCTGCAGCTGGTGGTGGTGATGGTGACTCAGCTCGTGGTGCGAAGTGCTCTGCAAGCCGTCGCCAGGGGAGACTGGACCGGACATCACGATCGGGTATTCGATCACTTCGACCTTCTCCAGCTGTAA

Protein sequence:

>DPOGS202832-PA
MAWQVRFTRDGRQRLAGVLRALLIAQLAISLVMVIFCYNVTVKVMSLLKNIHKVTVMLFYALLLLHAYCMKLHYTSGFRLISWLLRCPHWPRAAPVTRLWLISGCLVALNGLLVHAACKSTLKALMKELSSSLRIGISHYLSEPTWKRIMDTMQVELNCCGVESPSDWHEIPWINMDFLNEDSELVMKLSGTDGKALPPVSPYSCCSPHVLAACCHDPLQQFEDSWWGSAAGATLSARSCRDAVGAPLARAALAIHTLSALALVLQLVVVMVTQLVVRSALQAVARGDWTGHHDRVFDHFDLLQL-