DPOGS202848 | ||
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Transcript | DPOGS202848-TA | 198 bp |
Protein | DPOGS202848-PA | 65 aa |
Genomic position | DPSCF300018 + 1076759-1077238 | |
RNAseq coverage | 48316x (Rank: top 0%) |
Annotation | ||||
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Heliconius | HMEL002686 | 5e-18 | 100.00% |   |
Bombyx | BGIBMGA010487-TA | 5e-18 | 100.00% |   |
Drosophila | RpL36A-PA | 8e-18 | 81.25% |   |
EBI UniRef50 | UniRef50_E0W3A9 | 8e-18 | 87.50% | 60S ribosomal protein L44, putative n=7 Tax=Pancrustacea RepID=E0W3A9_PEDHC |
NCBI RefSeq | XP_002432853.1 | 1e-18 | 87.50% | 60S ribosomal protein L44, putative [Pediculus humanus corporis] |
NCBI nr blastp | gi|242024878 | 3e-17 | 87.50% | 60S ribosomal protein L44, putative [Pediculus humanus corporis] |
NCBI nr blastx | gi|315115413 | 2e-25 | 93.75% | ribosomal protein L36A [Euphydryas aurinia] |
Group | ||||
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Gene Ontology | GO:0005840 | 2.5e-33 | ribosome | |
GO:0006412 | 2.5e-33 | translation | ||
GO:0005622 | 2.5e-33 | intracellular | ||
GO:0003735 | 2.5e-33 | structural constituent of ribosome | ||
KEGG pathway | api:100159536 | 1e-16 |   | |
  | K02929 (RP-L44e, RPL44) | maps-> | Ribosome | |
InterPro domain | [18-65] IPR000552 | 2.5e-33 | Ribosomal protein L44e | |
[12-54] IPR011332 | 8.3e-10 | Ribosomal protein, zinc-binding domain | ||
Orthology group | MCL11497 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202848-TA
ATGACCGCAAACAACAGGGTTACGGTGGTCAGTCCAAACCCATCTTCAAAAAGAAGGCAAGCGAAAACCACCAAAAAGATTGTACTCCGTCTTGAGTGTGCTGACTGCAAGGTTCGATCACAGGTGGCCTTGAAGCGTTGCAAGCACTTCGAACTCGGAGGAGACAAGAAGAGAAAGGGACAGATGATTCAGTTCTAA
>DPOGS202848-PA
MTANNRVTVVSPNPSSKRRQAKTTKKIVLRLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF-