Monarch geneset OGS2.0

DPOGS202877
TranscriptDPOGS202877-TA984 bp
ProteinDPOGS202877-PA327 aa
Genomic positionDPSCF300921 + 615-5340
RNAseq coverage2x (Rank: top 91%)
Annotation
HeliconiusHMEL0077073e-5397.96% 
BombyxBGIBMGA000891-TA5e-6295.58% 
DrosophilaCG8916-PB2e-9357.14% 
EBI UniRef50UniRef50_E0X9H51e-13690.94%Ionotropic GABA-aminobutyric acid receptor GRD n=7 Tax=Endopterygota RepID=E0X9H5_BOMMO
NCBI RefSeqNP_001182633.12e-13790.94%ionotropic GABA-aminobutyric acid receptor GRD [Bombyx mori]
NCBI nr blastpgi|3076119334e-13690.94%ionotropic GABA-aminobutyric acid receptor GRD [Bombyx mori]
NCBI nr blastxgi|3076119332e-13890.94%ionotropic GABA-aminobutyric acid receptor GRD [Bombyx mori]
Group
Gene OntologyGO:00160213.3e-95integral to membrane
GO:00068113.3e-95ion transport
GO:00160201.3e-30membrane
GO:00068102.2e-18transport
GO:00052302.2e-18extracellular ligand-gated ion channel activity
KEGG pathway 
InterPro domain[1-244] IPR0062013.3e-95Neurotransmitter-gated ion-channel
[80-171] IPR0060291.3e-30Neurotransmitter-gated ion-channel transmembrane domain
[83-103] IPR0060283e-22Gamma-aminobutyric acid A receptor
[1-80] IPR0062022.2e-18Neurotransmitter-gated ion-channel ligand-binding
Orthology groupMCL16211 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS202877-TA
ATGGAACTCCGTAATTTCCCGATGGACCGTCAATCCTGCCCACTCATTCTTGGCAGCTATGCCTATTCCAATCAGCAGCTAGTGTATCAATGGCAGAACTCCCAGAGCGTCAACTTTGTTCCGGGCATGACATTATCCCAATTTGATCTCATCAGCTTCCCATATAGAAATTTTACATTCACCAGACGTGAAGGTGACTTTTCTGTCCTCCAAGTATCTTTCAACCTGAAGCGACACACGGGGTATTTTCTCATTCAAGTGTACGTGCCCTGCATACTCATAGTGGTACTATCATGGGTATCCTTCTGGATTCACAGAGAGGCGACATCAGACCGCGTGGGACTCGGCATCACGACCGTTTTAACTCTGTCAACAATCAGCTTGGACTCACGCACAGATCTTCCGAAGGTGCGTTACGCCACTGCACTCGACTGGTTTCTTTTGATGAGCTTCTTCTATTGTATCGCTACACTGCTTGAGTTTGCTGGTGTACACTATTTTACAAAGGTCGGTTCCGGCGAAATAGTGATTGATGATTCAGAGTGGGAAGACTTGATCGAGGAGGTCGGTGGTGACGCCTTCGCAGCGAGACAGCTGGCTGTGAGGAGACGAAGTTCCGCCAGATCTTCAAATAACTTTAGTATGCCCGGCGTATCAGACAATGAAGGCGAAATGCAGGACCAGCAATCAGTTCGTCTGACGATGGAGCGCACCACGCAGACAGAGGTGCGGGTGCCTCACTGGAGACAACTGCTGTACTGTCTAGCAGGAGACGATCAATATAGAAGGCAGCGGCAAAGAGAAGCTGGACTATTCTATGGACTGCTACTTCAGACAATACTGGCGAGACACGCGACTTTCCTTCCTCGGCCCGATTCGATCCCTTTCCCTCTCGATAAAGATGCTGGAGAGGATCTGGCGGCCAGACACTTACTTCTACAATGGGAAACATTCATACGTTCACACCATTACCGTGCCAAATAA

Protein sequence:

>DPOGS202877-PA
MELRNFPMDRQSCPLILGSYAYSNQQLVYQWQNSQSVNFVPGMTLSQFDLISFPYRNFTFTRREGDFSVLQVSFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATLLEFAGVHYFTKVGSGEIVIDDSEWEDLIEEVGGDAFAARQLAVRRRSSARSSNNFSMPGVSDNEGEMQDQQSVRLTMERTTQTEVRVPHWRQLLYCLAGDDQYRRQRQREAGLFYGLLLQTILARHATFLPRPDSIPFPLDKDAGEDLAARHLLLQWETFIRSHHYRAK-