Monarch geneset OGS2.0

DPOGS202902
TranscriptDPOGS202902-TA711 bp
ProteinDPOGS202902-PA236 aa
Genomic positionDPSCF300126 + 128760-134234
RNAseq coverage2910x (Rank: top 4%)
Annotation
HeliconiusHMEL0046864e-8380.67% 
BombyxBGIBMGA004175-TA1e-7876.76% 
DrosophilaAdam-PA3e-3947.11% 
EBI UniRef50UniRef50_Q16MK26e-3949.51%Eukaryotic translation initiation factor 3 subunit J n=9 Tax=Endopterygota RepID=EIF3J_AEDAE
NCBI RefSeqNP_001037664.14e-7776.76%eukaryotic translation initiation factor 3 subunit J [Bombyx mori]
NCBI nr blastpgi|1129830907e-7676.76%eukaryotic translation initiation factor 3 subunit J [Bombyx mori]
NCBI nr blastxgi|1129830907e-10478.42%eukaryotic translation initiation factor 3 subunit J [Bombyx mori]
Group
KEGG pathway 
InterPro domain[1-236] IPR0139062.1e-68Translation initiation factor eIF3 subunit
[123-199] IPR0231946.6e-25Eukaryotic translation initiation factor 3-like domain
Orthology groupMCL12159 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS202902-TA
ATGGACGTGTCGTGGGATGCTGATAATTTTGAACCAAAACTTCCGACCACGTTGGCTTCCAATAAATGGGAAGGCGAGGACGAGGAAGAAACAGTCAAGGACAGCTGGGAGGATGAAGAAGAAGAAAAGAAAGACGAAGAAAAGAAAGAAACCGTGCCGCCTCCTCCGAAACCTAAAAAGAAAATTCTAGATAAAATTGCTGAAAAAGAGCGTCTGGAACGTCAGAAGTCAGTGAAACAAGTTGTCGAGAAAGAAGAATTGACCCCGGAAGAGAAGCTGGCTGAGAAGCTGCGTCAGCAGAAATTACAAGAGGAATCCGATTTACTGCTGGCCTTGGAGACATTTGGTGTAACAGACGGAGCCGGTAAACTAGATTGCTTCCATCCAACAAATAAACAGGAGTTCACAGATTTTGCAGAGCTTCTGTGCAAAAAAATCAACATTTACAAAGCCAAGGATGAATTTCCCGGATTTGTTGATGAGCTGGTCAAGAATATTATAGTACAAATGTCGTCCGCGGATATTAAGAGGATAAAGATGACAGTCGACAATCTGTACATTGAAAAACAGAAAGCCGAGAAAAACGAAAAGGCCAAGAAACCTAACAAGGGGAAGGGGAAGGCTAAGTTAAAAGTGGAGGGGGAGAGTGCTCACTTGAACCAGTACGAGGCCTATGGCACTTTTGACGACGATTTCGACGACTTTATGTAA

Protein sequence:

>DPOGS202902-PA
MDVSWDADNFEPKLPTTLASNKWEGEDEEETVKDSWEDEEEEKKDEEKKETVPPPPKPKKKILDKIAEKERLERQKSVKQVVEKEELTPEEKLAEKLRQQKLQEESDLLLALETFGVTDGAGKLDCFHPTNKQEFTDFAELLCKKINIYKAKDEFPGFVDELVKNIIVQMSSADIKRIKMTVDNLYIEKQKAEKNEKAKKPNKGKGKAKLKVEGESAHLNQYEAYGTFDDDFDDFM-