DPOGS202902 | ||
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Transcript | DPOGS202902-TA | 711 bp |
Protein | DPOGS202902-PA | 236 aa |
Genomic position | DPSCF300126 + 128760-134234 | |
RNAseq coverage | 2910x (Rank: top 4%) |
Annotation | ||||
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Heliconius | HMEL004686 | 4e-83 | 80.67% |   |
Bombyx | BGIBMGA004175-TA | 1e-78 | 76.76% |   |
Drosophila | Adam-PA | 3e-39 | 47.11% |   |
EBI UniRef50 | UniRef50_Q16MK2 | 6e-39 | 49.51% | Eukaryotic translation initiation factor 3 subunit J n=9 Tax=Endopterygota RepID=EIF3J_AEDAE |
NCBI RefSeq | NP_001037664.1 | 4e-77 | 76.76% | eukaryotic translation initiation factor 3 subunit J [Bombyx mori] |
NCBI nr blastp | gi|112983090 | 7e-76 | 76.76% | eukaryotic translation initiation factor 3 subunit J [Bombyx mori] |
NCBI nr blastx | gi|112983090 | 7e-104 | 78.42% | eukaryotic translation initiation factor 3 subunit J [Bombyx mori] |
Group | ||||
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KEGG pathway |   | |||
InterPro domain | [1-236] IPR013906 | 2.1e-68 | Translation initiation factor eIF3 subunit | |
[123-199] IPR023194 | 6.6e-25 | Eukaryotic translation initiation factor 3-like domain | ||
Orthology group | MCL12159 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202902-TA
ATGGACGTGTCGTGGGATGCTGATAATTTTGAACCAAAACTTCCGACCACGTTGGCTTCCAATAAATGGGAAGGCGAGGACGAGGAAGAAACAGTCAAGGACAGCTGGGAGGATGAAGAAGAAGAAAAGAAAGACGAAGAAAAGAAAGAAACCGTGCCGCCTCCTCCGAAACCTAAAAAGAAAATTCTAGATAAAATTGCTGAAAAAGAGCGTCTGGAACGTCAGAAGTCAGTGAAACAAGTTGTCGAGAAAGAAGAATTGACCCCGGAAGAGAAGCTGGCTGAGAAGCTGCGTCAGCAGAAATTACAAGAGGAATCCGATTTACTGCTGGCCTTGGAGACATTTGGTGTAACAGACGGAGCCGGTAAACTAGATTGCTTCCATCCAACAAATAAACAGGAGTTCACAGATTTTGCAGAGCTTCTGTGCAAAAAAATCAACATTTACAAAGCCAAGGATGAATTTCCCGGATTTGTTGATGAGCTGGTCAAGAATATTATAGTACAAATGTCGTCCGCGGATATTAAGAGGATAAAGATGACAGTCGACAATCTGTACATTGAAAAACAGAAAGCCGAGAAAAACGAAAAGGCCAAGAAACCTAACAAGGGGAAGGGGAAGGCTAAGTTAAAAGTGGAGGGGGAGAGTGCTCACTTGAACCAGTACGAGGCCTATGGCACTTTTGACGACGATTTCGACGACTTTATGTAA
>DPOGS202902-PA
MDVSWDADNFEPKLPTTLASNKWEGEDEEETVKDSWEDEEEEKKDEEKKETVPPPPKPKKKILDKIAEKERLERQKSVKQVVEKEELTPEEKLAEKLRQQKLQEESDLLLALETFGVTDGAGKLDCFHPTNKQEFTDFAELLCKKINIYKAKDEFPGFVDELVKNIIVQMSSADIKRIKMTVDNLYIEKQKAEKNEKAKKPNKGKGKAKLKVEGESAHLNQYEAYGTFDDDFDDFM-