| DPOGS202911 | ||
|---|---|---|
| Transcript | DPOGS202911-TA | 435 bp |
| Protein | DPOGS202911-PA | 144 aa |
| Genomic position | DPSCF300126 + 348988-350626 | |
| RNAseq coverage | 17014x (Rank: top 1%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011775 | 4e-75 | 93.06% | |
| Bombyx | BGIBMGA004191-TA | 1e-72 | 91.49% | |
| Drosophila | CG3800-PA | 3e-40 | 54.43% | |
| EBI UniRef50 | UniRef50_Q8T8R1 | 3e-38 | 54.43% | CCHC-type zinc finger protein CG3800 n=16 Tax=Neoptera RepID=Y3800_DROME |
| NCBI RefSeq | NP_001037117.1 | 3e-71 | 91.49% | zinc finger protein [Bombyx mori] |
| NCBI nr blastp | gi|112982721 | 7e-70 | 91.49% | zinc finger protein [Bombyx mori] |
| NCBI nr blastx | gi|112982721 | 4e-80 | 91.49% | zinc finger protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008270 | 2.9e-14 | zinc ion binding | |
| GO:0003676 | 2.9e-14 | nucleic acid binding | ||
| KEGG pathway | ||||
| InterPro domain | [104-140] IPR013084 | 2.9e-14 | Zinc finger, CCHC retroviral-type | |
| [79-95] IPR001878 | 1.3e-08 | Zinc finger, CCHC-type | ||
| Orthology group | MCL13457 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202911-TA
ATGAGTTCGAGCGTATGCTATAAGTGCAACAGGAAGGGGCACTTCGCCCGCGAGTGCACGCAGAGCGGTGTCGGAGCGCTAGACGCCGGCTTCAACCGACAGCGGGAGAAGTGTTTCAAATGTAATCGCACCGGCCACTTCGCCAGGGACTGCAAGGAGGAGGCCGACCGTTGCTATAGGTGTAACGGCACCGGGCACATAGCGCGGGAGTGCGCGCAGAGCCCCGACGAGCCGTCGTGCTACAACTGCAACAAGACCGGGCACATCGCGCGGAACTGCCCCGAGGGCGGGCGGGACAACTCCAACCAGACCTGCTACAACTGCAACAAGACCGGCCACATCTCGCGCAACTGTCCCGACGGCACCAAGACCTGCTACGTGTGCGGCAAGCCGGGCCACATCTCGCGCGACTGCGACGAGGCCGACAGGAACTAA
>DPOGS202911-PA
MSSSVCYKCNRKGHFARECTQSGVGALDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKTGHISRNCPDGTKTCYVCGKPGHISRDCDEADRN-