Monarch geneset OGS2.0

DPOGS202924
TranscriptDPOGS202924-TA711 bp
ProteinDPOGS202924-PA236 aa
Genomic positionDPSCF300220 - 142876-150199
RNAseq coverage153x (Rank: top 53%)
Annotation
HeliconiusHMEL0178222e-6678.44% 
BombyxBGIBMGA005129-TA1e-1836.99% 
DrosophilaPpn-PE2e-2440.26% 
EBI UniRef50UniRef50_E2B9277e-2641.01%Thrombospondin type-1 domain-containing protein 4 n=4 Tax=Formicidae RepID=E2B927_HARSA
NCBI RefSeqXP_001993057.12e-2738.64%GH13615 [Drosophila grimshawi]
NCBI nr blastpgi|3838648313e-2639.05%PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 16-like [Megachile rotundata]
NCBI nr blastxgi|3072118468e-3139.20%Thrombospondin type-1 domain-containing protein 4 [Harpegnathos saltator]
Group
KEGG pathway 
InterPro domain[60-96] IPR0008849.3e-07Thrombospondin, type 1 repeat
Orthology groupMCL34468 Lepidoptera specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS202924-TA
ATGGAAGACGTTTTAAAGAATGGTAATGCGTTTACCGAAAGCTACAAGCGAGCTTTAAAAATCCTTAAAAGTAAAAAGTATATTGCTCTCGTTGTATTCATCGCTGTGTTCTTGAGGAAGCAGTTAACATACGCACAAACAAACACAGAAGTCGGTTTCCCATTAAACAACAGCAATAAAAGTGCTACAATATACGCCTGGAGTACTTGGGGTAGCTGGAGTTCCTGTTCAAGGTCATGTGGTGGAGGAGTCGCTGTTCAAGAGAGACACTGTCTACCCAGGGATCCTACACGGTGGCGCCGCAGCAGGAAGAGAAGGAAACTGGGCAGAGAGGACAGATCGCGTCGAGCTCGTACTGCCAACAGTGTTGTGAATGTCCCAGATTGTGCCGGACTCGGAAGACGATACCACGAGTGTAATACAGAGCCATGTCCGGGATCGTATCTGGATTCTCGCGGGGAACAATGCGCGATGTACGACCGGAGGCCGTTTCGAGGCAGGTTCTATACATGGGTGCCGTACGTCGACGGAAACGCCCCATGTATTCTCAACTGCCGGCCTCGTGGACAGCAGTTCTACGCTTCACTAGCCCTAGTCGCTGATGGAACTTCCTGCACAAAACCCGGTTACCGCGCTATATGTGTTCAGGGCTCCTGTAAGCGCCATCTAGCGGAAACATCAGCATTGTCACTCCAAAGAACTGCTGATTAG

Protein sequence:

>DPOGS202924-PA
MEDVLKNGNAFTESYKRALKILKSKKYIALVVFIAVFLRKQLTYAQTNTEVGFPLNNSNKSATIYAWSTWGSWSSCSRSCGGGVAVQERHCLPRDPTRWRRSRKRRKLGREDRSRRARTANSVVNVPDCAGLGRRYHECNTEPCPGSYLDSRGEQCAMYDRRPFRGRFYTWVPYVDGNAPCILNCRPRGQQFYASLALVADGTSCTKPGYRAICVQGSCKRHLAETSALSLQRTAD-