| DPOGS202936 | ||
|---|---|---|
| Transcript | DPOGS202936-TA | 579 bp |
| Protein | DPOGS202936-PA | 192 aa |
| Genomic position | DPSCF300220 + 85396-91628 | |
| RNAseq coverage | 25x (Rank: top 77%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL017822 | 4e-53 | 59.39% | |
| Bombyx | BGIBMGA001435-TA | 6e-23 | 37.84% | |
| Drosophila | CG6232-PB | 2e-28 | 40.91% | |
| EBI UniRef50 | UniRef50_F6YPW6 | 5e-29 | 42.07% | Papilin, proteoglycan-like sulfated glycoprotein (Fragment) n=2 Tax=Xenopus (Silurana) tropicalis RepID=F6YPW6_XENTR |
| NCBI RefSeq | XP_002003907.1 | 9e-32 | 43.59% | GI20499 [Drosophila mojavensis] |
| NCBI nr blastp | gi|195118766 | 1e-30 | 43.59% | GI20499 [Drosophila mojavensis] |
| NCBI nr blastx | gi|195118766 | 2e-32 | 43.59% | GI20499 [Drosophila mojavensis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008237 | 3.4e-07 | metallopeptidase activity | |
| GO:0008270 | 3.4e-07 | zinc ion binding | ||
| GO:0005578 | 3.4e-07 | proteinaceous extracellular matrix | ||
| KEGG pathway | ||||
| InterPro domain | [15-87] IPR000884 | 6.9e-12 | Thrombospondin, type 1 repeat | |
| [28-46] IPR013273 | 3.4e-07 | Peptidase M12B, ADAM-TS | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202936-TA
ATGTTAACGTCAGCAACAAACGTTACTGATAGTAGTCAGAATGAAGACGTGACGTCATATGCTTGGAGTGCTTGGAGTTCTTGGAGCGCGTGTTCTCGGACCTGTGGAGGTGGTGTTGCGATGCAGAAAAGACAGTGCTTGTCCAGATCAAGTAATCCATCTAATATCTCTGAAACTGATTCCATGATTCGGGTGGCGAGACATGTCCAGGACTGTCTCGGTCCGTCTAGAAGATATCACGAATGCAACACAAAGCCATGTCCAGGAGAAGATAAAGACATGCGAGCTGTTCAGTGCTCCAGTTATGACAAGAGACCATTTCGAGGAAGATTCTACACTTGGATCCCATACATCGATGGTGATTCACCCTGTATTTTAAACTGTCGCCCCACTGGACAACAATTCTATGCATCGCTCTCCCTAGTTCGGGACGGCACACCCTGTACGAAGCCGGGGTACAGAGCTATTTGTGTACAGGGGACTTGTAAGAATATTGAGTTCGAAATAGGAACGTGTAAGGAGAATGCTAGATTCAGAACGTGTCAGAGGAAATTGTTGCAGTTTACGGACCGGAAATAG
>DPOGS202936-PA
MLTSATNVTDSSQNEDVTSYAWSAWSSWSACSRTCGGGVAMQKRQCLSRSSNPSNISETDSMIRVARHVQDCLGPSRRYHECNTKPCPGEDKDMRAVQCSSYDKRPFRGRFYTWIPYIDGDSPCILNCRPTGQQFYASLSLVRDGTPCTKPGYRAICVQGTCKNIEFEIGTCKENARFRTCQRKLLQFTDRK-