DPOGS202976 | ||
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Transcript | DPOGS202976-TA | 510 bp |
Protein | DPOGS202976-PA | 169 aa |
Genomic position | DPSCF300068 - 684189-685496 | |
RNAseq coverage | 832x (Rank: top 15%) |
Annotation | ||||
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Heliconius | HMEL014080 | 1e-76 | 84.02% |   |
Bombyx | BGIBMGA013112-TA | 7e-51 | 56.58% |   |
Drosophila | crl-PA | 9e-86 | 87.35% |   |
EBI UniRef50 | UniRef50_B4H4L3 | 4e-84 | 89.09% | GL18350 n=5 Tax=Drosophila RepID=B4H4L3_DROPE |
NCBI RefSeq | XP_973689.1 | 6e-91 | 93.98% | PREDICTED: similar to ubiquitin-conjugating enzyme E2 g [Tribolium castaneum] |
NCBI nr blastp | gi|91078920 | 1e-89 | 93.98% | PREDICTED: similar to ubiquitin-conjugating enzyme E2 g [Tribolium castaneum] |
NCBI nr blastx | gi|340728561 | 2e-90 | 94.01% | PREDICTED: ubiquitin-conjugating enzyme E2 G2-like [Bombus terrestris] |
Group | ||||
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Gene Ontology | GO:0016881 | 5e-50 | acid-amino acid ligase activity | |
KEGG pathway | tca:662505 | 2e-90 |   | |
  | K04555 (UBE2G2, UBC7) | maps-> | Ubiquitin mediated proteolysis | |
  |   |   | Parkinson's disease | |
  |   |   | Protein processing in endoplasmic reticulum | |
InterPro domain | [1-163] IPR016135 | 1.5e-75 | Ubiquitin-conjugating enzyme/RWD-like | |
[8-157] IPR000608 | 5e-50 | Ubiquitin-conjugating enzyme, E2 | ||
Orthology group | MCL14113 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202976-TA
ATGGCTGGATCGGCCCTACGGCGTCTTATGGCCGAGTACAAACAACTAACACTAAACCCTCCCGAAGGAATCATTGCTGGACCTGTTAATGAAGAAAACTTTTTTGAATGGGAGGCTCTTATAACAGGTCCAGAGGGAACATGCTTCGAGGGTGGCATATTTCCCGCCAAGCTCGTTTTCCCCCCGGACTACCCACTAAGTCCACCCAAAATGCAATTTATTTGTGAAATGTTTCATCCAAATATATATGCGGATGGGCGAGTGTGCATATCAATTCTCCATGCTCCGGGAGATGATCCTATGGGCTATGAGAGCAGTGCCGAGCGTTGGTCCCCAGTCCAGAGTGTGGAAAAAATACTGTTATCAGTGGTCAGCATGCTTGCTGAACCAAATGACGAGAGTGGAGCCAATGTCGATGCGGCAAAGATGTGGCGAGAGGACAGAGAACAATTCAACAAAATAGCAGAGCGTCTTGTTCGCAAAACATTGGGTCTGCCTCCACCCGAATAG
>DPOGS202976-PA
MAGSALRRLMAEYKQLTLNPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGIFPAKLVFPPDYPLSPPKMQFICEMFHPNIYADGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDAAKMWREDREQFNKIAERLVRKTLGLPPPE-