DPOGS202997 | ||
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Transcript | DPOGS202997-TA | 318 bp |
Protein | DPOGS202997-PA | 105 aa |
Genomic position | DPSCF300068 - 107050-110629 | |
RNAseq coverage | 6x (Rank: top 87%) |
Annotation | ||||
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Heliconius | HMEL011022 | 7e-34 | 67.71% |   |
Bombyx | BGIBMGA013872-TA | 5e-08 | 42.11% |   |
Drosophila | Awh-PB | 1e-21 | 68.85% |   |
EBI UniRef50 | UniRef50_G1UCX1 | 1e-30 | 98.36% | Arrowhead PA n=2 Tax=Obtectomera RepID=G1UCX1_BOMMO |
NCBI RefSeq | XP_971202.1 | 9e-23 | 68.75% | PREDICTED: similar to GA10520-PA [Tribolium castaneum] |
NCBI nr blastp | gi|379698940 | 6e-30 | 98.36% | arrowhead PA [Bombyx mori] |
NCBI nr blastx | gi|379698940 | 8e-32 | 98.36% | arrowhead PA [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0008270 | 5.8e-13 | zinc ion binding | |
KEGG pathway |   | |||
InterPro domain | [50-105] IPR001781 | 5.8e-13 | Zinc finger, LIM-type | |
Orthology group | MCL34476 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202997-TA
ATGAATTCTTATCTCGTGTATCAATTTGGTAAATCGAAAAATGTTTCGCGCACATCGCGAGACGGAGGTTTTGCCTTCACTAGACATAGTAAGAATCCCTTGTACCACCTGGCGGTGAGAGCTGTGGTAGTCACGGAGCATCGCACGTGTTGTGCCTGTGGGGAGCCCATAGCTGATCGCTTCCTACTGGAAGTGGGCGGCGGCGCATGGCACACGGGCTGCCTGAGATGCTGTGTCTGTGCTGTGCAATTAGACAGACATCCCTCCTGCTTTCTCAGAGACAGACAGGTGTACTGCAAGCAAGACTACGCCAAGTGA
>DPOGS202997-PA
MNSYLVYQFGKSKNVSRTSRDGGFAFTRHSKNPLYHLAVRAVVVTEHRTCCACGEPIADRFLLEVGGGAWHTGCLRCCVCAVQLDRHPSCFLRDRQVYCKQDYAK-