DPOGS202998 | ||
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Transcript | DPOGS202998-TA | 717 bp |
Protein | DPOGS202998-PA | 238 aa |
Genomic position | DPSCF300068 - 100196-101316 | |
RNAseq coverage | 14x (Rank: top 82%) |
Annotation | ||||
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Heliconius | HMEL011021 | 4e-118 | 90.00% |   |
Bombyx | BGIBMGA003888-TA | 4e-108 | 88.32% |   |
Drosophila | Awh-PB | 3e-85 | 70.22% |   |
EBI UniRef50 | UniRef50_G1UCX1 | 6e-118 | 96.74% | Arrowhead PA n=2 Tax=Obtectomera RepID=G1UCX1_BOMMO |
NCBI RefSeq | XP_971202.1 | 2e-87 | 72.29% | PREDICTED: similar to GA10520-PA [Tribolium castaneum] |
NCBI nr blastp | gi|379698940 | 2e-117 | 96.74% | arrowhead PA [Bombyx mori] |
NCBI nr blastx | gi|379698940 | 1e-116 | 96.74% | arrowhead PA [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0003677 | 7.3e-23 | DNA binding | |
GO:0006355 | 7.3e-23 | regulation of transcription, DNA-dependent | ||
GO:0043565 | 6.4e-22 | sequence-specific DNA binding | ||
GO:0003700 | 6.4e-22 | sequence-specific DNA binding transcription factor activity | ||
GO:0005515 | 1.2e-20 | protein binding | ||
GO:0008270 | 5.9e-15 | zinc ion binding | ||
KEGG pathway |   | |||
InterPro domain | [112-179] IPR012287 | 7.3e-23 | Homeodomain-related | |
[113-175] IPR001356 | 6.4e-22 | Homeobox | ||
[97-172] IPR009057 | 1.2e-20 | Homeodomain-like | ||
[31-87] IPR001781 | 5.9e-15 | Zinc finger, LIM-type | ||
Orthology group | MCL10410 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202998-TA
ATGTTACGATACGTTTTCGTCGCTACTAAATTTACTAACATCACCTCCACAATAACGAGAGCGGTTTTGCTTAGGAGTTTTGGGGCAAAGTGCTCCAAGTGCTGCCGAGGCATCTCTTCATCAGACTGGGTTCGCAAGGCTCGTGAGCAGGTATACCATCTGGCCTGCTTCGCCTGCGACGCCTGCGGCCGTCAGCTATCCACGGGGGAACAGTTCGCTTTGCACGAGGACAGAGTACTCTGCAAGCCGCACTACTTGGAAACATTGGATGGAGGATCTATTTCCTCAGATGGCAAGTGCAATGGCTGTGACTCAGAAGGTTACCACAAAAGTAAAGCGAAACGCGTTCGTACGACTTTCACGGAAGAACAATTGCAAGTTCTCCAAGCTAACTTCCAGCTGGACTCGAACCCTGACGGCCAAGACCTGGAAAGGATCGCTCAAGTCACCGGTCTCAGCAAACGGGTCACACAAGTCTGGTTTCAAAATAGCCGTGCCAGGCAGAAGAAACATCAACATACGGGAAAAGGGAAACAGAACCAAGCGATGTCCCGCGAGGATGCGGTGGGGTTTGGTCGGCCCATCAACCTCCACCTCACGTATTCCTTCCAGAACAAACCGCCGTTCGTTCCGATAGATGGAACTTCTTTCACTGACTCATCAATGGACGAACTGTCCGAGGACTCCTCGATACACTGCATGCAGAGCGAGGTCTAG
>DPOGS202998-PA
MLRYVFVATKFTNITSTITRAVLLRSFGAKCSKCCRGISSSDWVRKAREQVYHLACFACDACGRQLSTGEQFALHEDRVLCKPHYLETLDGGSISSDGKCNGCDSEGYHKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQVTGLSKRVTQVWFQNSRARQKKHQHTGKGKQNQAMSREDAVGFGRPINLHLTYSFQNKPPFVPIDGTSFTDSSMDELSEDSSIHCMQSEV-