DPOGS203016 | ||
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Transcript | DPOGS203016-TA | 861 bp |
Protein | DPOGS203016-PA | 286 aa |
Genomic position | DPSCF300068 + 262341-271786 | |
RNAseq coverage | 720x (Rank: top 18%) |
Annotation | ||||
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Heliconius | HMEL011029 | 4e-134 | 97.13% |   |
Bombyx | BGIBMGA003874-TA | 6e-117 | 77.70% |   |
Drosophila | Pdp1-PD | 2e-87 | 71.13% |   |
EBI UniRef50 | UniRef50_Q8SZT1 | 2e-85 | 71.13% | GH27708p n=35 Tax=Eumetazoa RepID=Q8SZT1_DROME |
NCBI RefSeq | XP_001602868.1 | 1e-92 | 74.80% | PREDICTED: similar to CG17888-PC [Nasonia vitripennis] |
NCBI nr blastp | gi|380028288 | 8e-95 | 75.20% | PREDICTED: hepatic leukemia factor-like [Apis florea] |
NCBI nr blastx | gi|380028288 | 7e-100 | 69.59% | PREDICTED: hepatic leukemia factor-like [Apis florea] |
Group | ||||
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Gene Ontology | GO:0006355 | 4e-17 | regulation of transcription, DNA-dependent | |
GO:0043565 | 4e-17 | sequence-specific DNA binding | ||
GO:0003700 | 4e-17 | sequence-specific DNA binding transcription factor activity | ||
GO:0046983 | 4e-17 | protein dimerization activity | ||
KEGG pathway | ame:408449 | 2e-88 |   | |
  | K09057 (HLF) | maps-> | Circadian rhythm - fly | |
InterPro domain | [219-272] IPR011700 | 4e-17 | Basic leucine zipper | |
[218-282] IPR004827 | 2.8e-09 | Basic-leucine zipper (bZIP) transcription factor | ||
Orthology group | MCL12326 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS203016-TA
ATGTCATTAGCAAGGGGTCCGAGGCTCGAAGGCCTCTGTGGGGGGGCGGCGGTGGGGCGGCAGCCGCCCCCGCAGCTGCTGCCGCCGGCGCCGCCGCCGCCGCTGCCCTCGCCTCCGCAACTGCAGCACGGCCACGTCCAGGACGATGATAGGTGGAGTCAGTACCACATTTGGAGGCAGCACGTTTTTGTCAATGGCAAGTCGGTGAACAATAAAGATCCCCTGGAAGACAAGAAAGATGACAGCGAGTTGTGGGAGGCGCAGGCCGCCTTCCTGGGACCCAACCTCTGGGACAAGACGCTACCCTACGACCCAGATCTCAAGTACGTGGACTTAGACGAGTTCCTGTCCGAGAATGGCATGCCCGGAGAGGGTTTGGGCGGGGCGCATCTTGGCAGCTCGGCGTTCGGCGCTGGCGCGGGCCTGGGGCTCGGCCTGCAGGCGCCCGTCACCAAGCGCGAGCGCTCGCCCTCGCCCTCCGACTGCATGAGCCCTGACACCATCAACCCGCCACTATCGCCAGCCGACTCCACATTCTCTATGGCGTCGTCCGGTCGTGACTTTGATCCCCGCACAAGGGCATTCTCAGACGAGGAGCTGAAGCCCCAGCCCATGATCAAAAAGTCCCGGAAACAGTTTGTACCCGATGACCTGAAAGACGACAAGTACTGGGCCCGTCGGCGGAAGAACAACATGGCCGCCAAGAGATCTCGTGACGCTCGCCGCATGAAGGAAAACCAAATCGCTCTGCGGGCTGGCTACCTCGAAAAGGAGAACATGGGTCTACGGCAGGAAGTGGAATTGCTGAAGAAGGAGAACCACATCCTGCGCGAGAAGCTTTCAAAGTACGCGGACGTATAA
>DPOGS203016-PA
MSLARGPRLEGLCGGAAVGRQPPPQLLPPAPPPPLPSPPQLQHGHVQDDDRWSQYHIWRQHVFVNGKSVNNKDPLEDKKDDSELWEAQAAFLGPNLWDKTLPYDPDLKYVDLDEFLSENGMPGEGLGGAHLGSSAFGAGAGLGLGLQAPVTKRERSPSPSDCMSPDTINPPLSPADSTFSMASSGRDFDPRTRAFSDEELKPQPMIKKSRKQFVPDDLKDDKYWARRRKNNMAAKRSRDARRMKENQIALRAGYLEKENMGLRQEVELLKKENHILREKLSKYADV-