| DPOGS203257 | ||
|---|---|---|
| Transcript | DPOGS203257-TA | 492 bp |
| Protein | DPOGS203257-PA | 163 aa |
| Genomic position | DPSCF300229 - 242235-247070 | |
| RNAseq coverage | 106x (Rank: top 60%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007651 | 1e-52 | 96.97% | |
| Bombyx | BGIBMGA000240-TA | 2e-54 | 89.81% | |
| Drosophila | CG31048-PB | 1e-38 | 47.10% | |
| EBI UniRef50 | UniRef50_Q9VAS8 | 1e-36 | 47.10% | CG31048, isoform B n=23 Tax=Neoptera RepID=Q9VAS8_DROME |
| NCBI RefSeq | XP_001121716.1 | 3e-54 | 61.94% | PREDICTED: similar to CG31048-PA [Apis mellifera] |
| NCBI nr blastp | gi|270014080 | 1e-56 | 60.25% | hypothetical protein TcasGA2_TC012780 [Tribolium castaneum] |
| NCBI nr blastx | gi|270014080 | 3e-53 | 60.25% | hypothetical protein TcasGA2_TC012780 [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 3.1e-10 | protein binding | |
| KEGG pathway | ||||
| InterPro domain | [1-72] IPR001452 | 3.1e-10 | Src homology-3 domain | |
| Orthology group | MCL18997 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203257-TA
ATGTGGATTCCATCGAAATCTCCTAAATTGGCAGTCGCTGTTTACAACTGGAAGGGAGATGTTCGTTCGGGACTGCCGCTTGAGATCGGAGAAACAGTACAAATATTGGAAGAAAATGGAGGTTGGTACCGTGGGTTCAGTACTAAGAACAGATCGGCTTGGGGTATATTCCCAAGCTGTGTGGTGTCGATCCGCCCGTGCACTGTCAAAGGTACTGGTGCCGCTGCGATAGCTGAACTAAAAGATGATCCTCTAGTACGGGAGATAGCTTGCGTGTTGAGAGAATGGGCTCGGCTTTGGAAGAAGCTTTATGTGGAGCGGGAGACGTACCGGTTCACAACAGTCGCGAAGGTGATGAGGGAACTGTTGAGCGGCCGTCGCGCTCTGTTGACGGGGACTCTGACACAGGACCAGACCAGGGCCTTGAGGCTGAGGCTCGTCGGGAAACTTGACTGGGGCAACCGGCCTCTTAAAGTTAGTTTAGGATTCTAA
>DPOGS203257-PA
MWIPSKSPKLAVAVYNWKGDVRSGLPLEIGETVQILEENGGWYRGFSTKNRSAWGIFPSCVVSIRPCTVKGTGAAAIAELKDDPLVREIACVLREWARLWKKLYVERETYRFTTVAKVMRELLSGRRALLTGTLTQDQTRALRLRLVGKLDWGNRPLKVSLGF-