DPOGS203259 | ||
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Transcript | DPOGS203259-TA | 687 bp |
Protein | DPOGS203259-PA | 228 aa |
Genomic position | DPSCF300229 - 198527-199213 | |
RNAseq coverage | 24x (Rank: top 77%) |
Annotation | ||||
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Heliconius | HMEL006693 | 2e-75 | 57.33% |   |
Bombyx | BGIBMGA002640-TA | 2e-73 | 55.56% |   |
Drosophila | Uch-PA | 8e-62 | 46.93% |   |
EBI UniRef50 | UniRef50_E5EVW1 | 3e-71 | 55.56% | Ubiquitin carboxy-terminal hydrolase CG4265 n=11 Tax=Neoptera RepID=E5EVW1_BOMMO |
NCBI RefSeq | NP_476940.1 | 2e-60 | 46.93% | ubiquitin carboxy-terminal hydrolase [Drosophila melanogaster] |
NCBI nr blastp | gi|312597590 | 9e-71 | 55.56% | ubiquitin carboxy-terminal hydrolase CG4265 [Bombyx mori] |
NCBI nr blastx | gi|312597590 | 2e-69 | 56.05% | ubiquitin carboxy-terminal hydrolase CG4265 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0006511 | 6.2e-88 | ubiquitin-dependent protein catabolic process | |
GO:0005622 | 6.2e-88 | intracellular | ||
GO:0004221 | 6.2e-88 | ubiquitin thiolesterase activity | ||
KEGG pathway |   | |||
InterPro domain | [1-228] IPR001578 | 6.2e-88 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 | |
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS203259-TA
ATGGCTGTTTCTTTGCCTATGGAAGCAAATCCTGAAACTATGAACAAATACCTTCAGAGGCTTGGCGTTTCTAACAAATGGCGTATGGTTGATGTTATGGGTTTAGAAGGTGATCCTTTAAAATGGGTGCCACGGCCAGTTCTCGCTGTTATACTTTTATTTCCGCTTTCTGAGCATTATGAAAGACATCGCTCTCAGCAGGAGAACGAGCTACAAATCAAACCTCAGCAACCTCCTAAGGACGTGTTCCATTTAAAACAAGTGCTCAGTAATGTGTGTGGGACAATTGCTCTAGTGCACAGTGTCGCTAATAATATTAATACCATCGATTTAGAAGATGGTATTTTAAAAGATTACTTGAAGTCCGCTTCAGGCTTGGACGCAGCAGCTAAAGGCGCTCTTTTGGAGAATTCAACACATATTTTTAGGGCATATGAGGAAGTTTTAAACTCAGCGAATAATCCTGCAAATGAAGACAGCGAACCTGTGAACAATCATTTTATAACATTTATCCATAAGAATGGTAATCTTTATGAGTTGGATGGTCGTAAGTCAATACCTATTAACCACGGCCCAACGACTCCGGAAACTCTGTTGGATGACTCTGCCAAAATTTGCCTGGAATTCATAGCTCGCGAGCCAGATAATATAGGTTTTAATGTCGTTGCTCTCGTTCCTGCTCAATAA
>DPOGS203259-PA
MAVSLPMEANPETMNKYLQRLGVSNKWRMVDVMGLEGDPLKWVPRPVLAVILLFPLSEHYERHRSQQENELQIKPQQPPKDVFHLKQVLSNVCGTIALVHSVANNINTIDLEDGILKDYLKSASGLDAAAKGALLENSTHIFRAYEEVLNSANNPANEDSEPVNNHFITFIHKNGNLYELDGRKSIPINHGPTTPETLLDDSAKICLEFIAREPDNIGFNVVALVPAQ-