| DPOGS203522 | ||
|---|---|---|
| Transcript | DPOGS203522-TA | 204 bp |
| Protein | DPOGS203522-PA | 67 aa |
| Genomic position | DPSCF300055 - 388790-389144 | |
| RNAseq coverage | 143x (Rank: top 54%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002790 | 1e-15 | 49.18% | |
| Bombyx | BGIBMGA004352-TA | 7e-35 | 98.51% | |
| Drosophila | d4-PA | 8e-33 | 83.58% | |
| EBI UniRef50 | UniRef50_E2C4M4 | 2e-32 | 91.04% | Zinc finger protein ubi-d4 A n=5 Tax=Formicidae RepID=E2C4M4_HARSA |
| NCBI RefSeq | XP_395098.3 | 5e-33 | 91.04% | PREDICTED: similar to d4 CG2682-PA, isoform A [Apis mellifera] |
| NCBI nr blastp | gi|307169876 | 8e-32 | 91.04% | Zinc finger protein ubi-d4 A [Camponotus floridanus] |
| NCBI nr blastx | gi|383856201 | 2e-34 | 91.04% | PREDICTED: zinc finger protein ubi-d4-like [Megachile rotundata] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 4e-14 | protein binding | |
| GO:0008270 | 1.2e-11 | zinc ion binding | ||
| KEGG pathway | ||||
| InterPro domain | [14-65] IPR013083 | 2.4e-17 | Zinc finger, RING/FYVE/PHD-type | |
| [1-67] IPR011011 | 7.3e-15 | Zinc finger, FYVE/PHD-type | ||
| [18-64] IPR019787 | 4e-14 | Zinc finger, PHD-finger | ||
| [17-63] IPR001965 | 1.2e-11 | Zinc finger, PHD-type | ||
| Orthology group | MCL19497 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203522-TA
ATGATCGTGTCGGTGCGCAAGTATCGCTGGCAGTGCATCGAGTGCAAGTGCTGCTCCGTGTGCGGGACCAGCGACAATGATGACCAGCTGTTGTTCTGTGATGACTGCGACCGCGGCTACCACATGTACTGCCTGGCGCCGCCGCTGGACGCGCCGCCCGAGGGTTCCTGGTCCTGCGCCCTCTGCATCAAGGAGTTCCACTGA
>DPOGS203522-PA
MIVSVRKYRWQCIECKCCSVCGTSDNDDQLLFCDDCDRGYHMYCLAPPLDAPPEGSWSCALCIKEFH-