DPOGS203522 | ||
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Transcript | DPOGS203522-TA | 204 bp |
Protein | DPOGS203522-PA | 67 aa |
Genomic position | DPSCF300055 - 388790-389144 | |
RNAseq coverage | 143x (Rank: top 54%) |
Annotation | ||||
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Heliconius | HMEL002790 | 1e-15 | 49.18% |   |
Bombyx | BGIBMGA004352-TA | 7e-35 | 98.51% |   |
Drosophila | d4-PA | 8e-33 | 83.58% |   |
EBI UniRef50 | UniRef50_E2C4M4 | 2e-32 | 91.04% | Zinc finger protein ubi-d4 A n=5 Tax=Formicidae RepID=E2C4M4_HARSA |
NCBI RefSeq | XP_395098.3 | 5e-33 | 91.04% | PREDICTED: similar to d4 CG2682-PA, isoform A [Apis mellifera] |
NCBI nr blastp | gi|307169876 | 8e-32 | 91.04% | Zinc finger protein ubi-d4 A [Camponotus floridanus] |
NCBI nr blastx | gi|383856201 | 2e-34 | 91.04% | PREDICTED: zinc finger protein ubi-d4-like [Megachile rotundata] |
Group | ||||
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Gene Ontology | GO:0005515 | 4e-14 | protein binding | |
GO:0008270 | 1.2e-11 | zinc ion binding | ||
KEGG pathway |   | |||
InterPro domain | [14-65] IPR013083 | 2.4e-17 | Zinc finger, RING/FYVE/PHD-type | |
[1-67] IPR011011 | 7.3e-15 | Zinc finger, FYVE/PHD-type | ||
[18-64] IPR019787 | 4e-14 | Zinc finger, PHD-finger | ||
[17-63] IPR001965 | 1.2e-11 | Zinc finger, PHD-type | ||
Orthology group | MCL19497 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS203522-TA
ATGATCGTGTCGGTGCGCAAGTATCGCTGGCAGTGCATCGAGTGCAAGTGCTGCTCCGTGTGCGGGACCAGCGACAATGATGACCAGCTGTTGTTCTGTGATGACTGCGACCGCGGCTACCACATGTACTGCCTGGCGCCGCCGCTGGACGCGCCGCCCGAGGGTTCCTGGTCCTGCGCCCTCTGCATCAAGGAGTTCCACTGA
>DPOGS203522-PA
MIVSVRKYRWQCIECKCCSVCGTSDNDDQLLFCDDCDRGYHMYCLAPPLDAPPEGSWSCALCIKEFH-