Monarch geneset OGS2.0

DPOGS203530
TranscriptDPOGS203530-TA4230 bp
ProteinDPOGS203530-PA1409 aa
Genomic positionDPSCF300055 - 127991-148156
RNAseq coverage985x (Rank: top 13%)
Annotation
HeliconiusHMEL0057580.057.73% 
BombyxBGIBMGA009172-TA2e-15441.26% 
DrosophilaLRP1-PC0.032.65% 
EBI UniRef50UniRef50_E9H3190.035.01%Putative uncharacterized protein n=2 Tax=Daphnia pulex RepID=E9H319_DAPPU
NCBI RefSeqXP_001958875.10.033.31%GF12345 [Drosophila ananassae]
NCBI nr blastpgi|3214628940.035.01%hypothetical protein DAPPUDRAFT_307561 [Daphnia pulex]
NCBI nr blastxgi|3214628940.034.83%hypothetical protein DAPPUDRAFT_307561 [Daphnia pulex]
Group
Gene OntologyGO:00055154.3e-15protein binding
KEGG pathwaydan:Dana_GF123450.0 
 K04550 (LRP1, CD91)maps-> Malaria
    Alzheimer's disease
InterPro domain[580-847] IPR0110424.5e-24Six-bladed beta-propeller, TolB-like
[251-288] IPR0021724.3e-15Low-density lipoprotein (LDL) receptor class A repeat
Orthology groupMCL10050 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS203530-TA
ATGCCGTGGCTGCCCCTGCACCACGTGTTCGCGCTGGGCGTGTGGGCCGGCCGCGTGTACTGGACGGACTGGGAGACGCGCGCGCTGCACTCCTGTAGGAGGACACCGCACCGAGCGTACAATGAGTCCTGGGGCGGCGGGCCGTCTGCGGGCGGCGCTTTGAGGTGTCGTGTGGAGGCGCGCGCCGTTCACAAACCTATGGACTTGCGGGTGTTGCATCCCGCACGACAACCGCCGCAAAGGGAACTAAAGGCGCTCTGCGAGAAATTAAACTGTACGGGTCTGTGCCTGTTGTCTCCGCTGGAGGGCGGCGCCACTGCTCACTGCGCGTGTCCCGAACACTTCGTGCTGGGAGCGGACGGTCGCTCGTGTTCCCCTAACTGCACGTCCGCCCACTTCGTGTGTCGCTCGTCCTTGAAGTGTATCCCGTTCTGGTGGCGTTGCGACACACAGGACGATTGCGGCGACGGGTCGGACGAGCCGGCCTCGTGTCCCGCCTTCCGCTGCTCCCCGGGACAGTTCCAGTGCGCCAACTCCCGCTGCGTCCACCCCGCCCACATATGTGACGGCGTGCAGCAGTGCGGGGACGGTAGCGACGAGCGGGACTGCGACGCCTTCACGTGCCTCGCCGCACAGTTCAAGTGTCCGGCGGCCGGCCGGGCGCCCGCCAGGTGCGTGCCCTCCGAGGCGCGCTGTAACGGAGAGAAAGACTGCGCCGGGGGCGAGGACGAGAAGGACTGCCCGCCCGTCAGCTGTCCGCCGCATACTTTCCTTTGCGGCTCGGGTGCGTGTGTTCCTCAAGTGTGGGTGTGTGACGGAGACGCCGACTGTAGCGACGGGTCCGACGAGCGCGGCTGCTCCTCCCGCCAGTGCGCTCGCGGGGAGTTCCGTTGTGCGTCGGGTCGTTGCGTGCCGCGAGAGTGGCTCTGTGACGGCGAGGCTGACTGTCCCGCGCTGGAAGACGAGGCACGCTGCGACGCTCATGCCGCCTGCGAGCCCACCTATTTCCGCTGCGCTGATATGCGCTGCATCCCCGGGCGCTGGCGGTGCGACTTCGAGGAGGACTGCGCCGACGGCTCGGACGAACGAGGCTGCACGCCCAGGAACTGCTCCGAGTCTGAGTTTCGCTGCGATAATGGAGAATGTATCAGAGGAGCGCTGCGGTGCTCGGGGGCCGCGGACTGCGCCGGCGGGGAGGACGAGCGAGCCTGCGCCGCCGCCTGCCCGACCAGCGCTAAACTCTGCACGCACTCGCAGGAGTGCCTCCAAAATGAGTGGTGGTGTGACGGGGAGGTGGACTGCGCAGATGGCTCGGACGAGGACAACTGTACTTCTAGCGCCACGACGATGGCCACTCACGCAGCTGCGACCCTGGATTGCGGGACACGTTTACGTTGTGGTGGTGTCGGTGGTGGGGGGTGGTGCGCTCCGAGCGCGTGGCGCTGCGACGGTCGGCGTGACTGTGCCGACGGGTCGGACGAGGAGGCAGGGATGTGTCGACACACCGTCTGCCCTCCGCCCATGGTCCGCTGCGGAGAGAACACCTGCATCCCACCACATCTGCTCTGCGACGGTTTCAGAGATTGCGCTGATGGCTCCGACGAAAATCCACTCCTTTGTAGCCGTAGCCGCAGTCGCTCGGAGTCCTTGTGTCCTCGTGACCAACAGCTATGCGGGGACGGTCGATGCGCGCCAGCGAACGCTCCCTGTCCCTCCGAGAGCGGCTGCACTTGGCGCACGTGCTCGCAGCTCTGTCTGCCCAAGCACGCGCACAATCACACCTGCAAATGCGTGGCCGGATACAAGCAACATCAGCTGGCGGACGGAACCTTCACGTGCGAGGCCACAGGTGAAAAGGCGAAAGTGTTGGTAGCATCGAGCGGGGCCCTCAAACTGCTGGAGCTTCACAAGCACGAACACGAGCCGCTGGCCGCCACGCCGCACTACAACGAGACCGTGGAGATAGTAAGCGTGTGCTCGGCTCCGGTGGGCGGCGTGTGGTGGGCGTGGTGGGCGGACGGCCACGGCCGCATCCGTCGTGTCCGGCTCGTGGCGGCTCGTGGTAAGCTGTCCCCCGGAGTCCCGGCTCGGTCGCCGCCGCTGCCCGACTCGTCACCAGACATGCGCGAGGCGGAGACCGTGGTGGAGGACGCCGGCACTGTCCGCGGGGTGGCCGTGGACCCCCTGGCCGAGAGACTCTACTGGACCAGTGTTCACGGGACGGAGGGGGCCTGGGTGGTGGGAACCGTGCACGCTGCCATGTTGGACGGCAGGCGACGGGTCACTCTGTGGAGACAACCGGGAGCAGAGCCCGATGACCTGGTCATATCACTGGAGACTGGCGAGCTTTTCTGGTCGGAACGTGGGTCGTGGGGTCGCGTGTGGAGCGCCCGTCTCCACGGCGGGGGAGTCCGCACCGCAGTCTCTCACGGTCTGCGGCGGCCGACCGCCCTGGCGCTGCTCGGCCCCGCCCTCAGACTCTTCACCCTGGACGCTCACCGCGGCGTGCTACGCAGCGACGCCCTGAGCGGGACCGACACCGTCGTGCACGCCGTGTTCGAGTCGGACGCCGCGCCACAACACGACGTGCCCACATATAAAGACGGTGCTCCGGTATCGCTGAGCGGTCGGTCGTGTTCCCGTATGGTGGTGTGGGAGGAGCACGTGTGGTGCGGCACTCCGCGGGCCGATGACAGGCACGGCGCCGCGGGGGCCGGGCGGGCGAGGGGCCGGCGCCCCGCCTCGGTCCACCTGCCGCGACACAGGGCTCCTGTGTCCGCCCTGGCTGTACTTCACCCCGCTCTGTTCTCTATACTCGCCAACGCGGAGGATCCCTGCAAGCTGTCCGACGGCCGGGAGTCCTGTCACCCCAGCGCTCTGTGTGTGCGGACAGGCCTTAAGGAGGGCGAGGCGCGGGCCTGCCTGTGTCCCGACGGACTGCAGCCCACCACCGACATCAACGATGATGTGGTGAGGTGCGTGGTGTCGGTGTCTACCCCGTCTCCCCCCTGCTCTTTGCCGTGTTCCCCGGGCGCGTGCGTGGTGCTGGGCGGGCAGGCGGCGTGCTCGTGCCCCGCGCTGTTCTCCGGCTCGCTGTGTCAGCACTACCGCTGCGTGGACCACTGCGGACCCCACGCCCGCTGTCACGTGCTGCCCGAAAACGATCACGCTCACGTCGGCGACCACGACCTCCCGCCCTTGACTTGCACATGTTACCCGGGTTGGACCGGGGAGCGCTGCGACAGGCAGATAGAAGCGAGCGACACGCGCGACAACGAGGCGCACACGGACGACACGCGACACGAGGACCGGGGCGGGGCACACGGGGCGGAGGACGAGTGCGCGAGGTGTGAGAACGGCGCCTCCTGCGAGAGGGGCCCGGGCGGCGTCACGTGTCGCTGCACATCGCAATATACCGGTCCTCGCTGTACGGAGTGCGCCGGCGGAGCCCCGGGCGCCGCGTGTCGCCAGAGAGAAGCCGAGCTGTGCCGAGACTACTGCTACAATAATGGCTCGTGTTCGTTGTCGGCGGGCGCCGTGGCCGGGGAGCGTGTGGCGCAGTGCTCGTGCGTGGCGGGCTGGACCGGCGCCAGGTGTGAGCTGAGAGATGATGCTGCTGGAGGGACAGCTGAATGGGGCTCGTGTACGGGCTCGTGTGCCCACGGCGGGCGCTGTGTGTCGGGCGTGGCCGGGGGAGCGTGCGCGTGCGCAGGCGCCTGGGGCGGCTCGCGCTGCAGACACTACGTGGGCCATGACAACGCCTGTGTGGCCAGAGCCTGCGCCCCTCCAGCTGTATGCGTCTGGAAAGCCTCCGACAATCCATCTGAGCCGGGGACTCCTTACTGCGCCTGTTCAGAGGGCGTCCAGTGTTCCGACACTGGTGTGGGGGCGGAGGGCGCGGGCTGGGGCACGGCCGGCGGGGCAGCACTCCTCGCCCTGGCTGCTGTACTGGCAGTGCTGCTAGCGGCGCTATACGTAGCCCACCGCCGGAGACACGGCGCGTTCGTCCACGCCCGCCTGTCGGAGGGAGTGGGCGAGGGTCTGGAGATCAGTAACCCGATGTACCTCGCCGGAGACGACGACCACGACACGGACACGCGCGACACACGGAATAACGGCGGAAATCACTTCGCGAATCCCATATATGATAGTATGTACGCACCGCAAGACACTAACCCCAGCGAGGAGCAGGCGTCGCTACTGGAGGCGCCTCGGCGAGCCACGCCGTGA

Protein sequence:

>DPOGS203530-PA
MPWLPLHHVFALGVWAGRVYWTDWETRALHSCRRTPHRAYNESWGGGPSAGGALRCRVEARAVHKPMDLRVLHPARQPPQRELKALCEKLNCTGLCLLSPLEGGATAHCACPEHFVLGADGRSCSPNCTSAHFVCRSSLKCIPFWWRCDTQDDCGDGSDEPASCPAFRCSPGQFQCANSRCVHPAHICDGVQQCGDGSDERDCDAFTCLAAQFKCPAAGRAPARCVPSEARCNGEKDCAGGEDEKDCPPVSCPPHTFLCGSGACVPQVWVCDGDADCSDGSDERGCSSRQCARGEFRCASGRCVPREWLCDGEADCPALEDEARCDAHAACEPTYFRCADMRCIPGRWRCDFEEDCADGSDERGCTPRNCSESEFRCDNGECIRGALRCSGAADCAGGEDERACAAACPTSAKLCTHSQECLQNEWWCDGEVDCADGSDEDNCTSSATTMATHAAATLDCGTRLRCGGVGGGGWCAPSAWRCDGRRDCADGSDEEAGMCRHTVCPPPMVRCGENTCIPPHLLCDGFRDCADGSDENPLLCSRSRSRSESLCPRDQQLCGDGRCAPANAPCPSESGCTWRTCSQLCLPKHAHNHTCKCVAGYKQHQLADGTFTCEATGEKAKVLVASSGALKLLELHKHEHEPLAATPHYNETVEIVSVCSAPVGGVWWAWWADGHGRIRRVRLVAARGKLSPGVPARSPPLPDSSPDMREAETVVEDAGTVRGVAVDPLAERLYWTSVHGTEGAWVVGTVHAAMLDGRRRVTLWRQPGAEPDDLVISLETGELFWSERGSWGRVWSARLHGGGVRTAVSHGLRRPTALALLGPALRLFTLDAHRGVLRSDALSGTDTVVHAVFESDAAPQHDVPTYKDGAPVSLSGRSCSRMVVWEEHVWCGTPRADDRHGAAGAGRARGRRPASVHLPRHRAPVSALAVLHPALFSILANAEDPCKLSDGRESCHPSALCVRTGLKEGEARACLCPDGLQPTTDINDDVVRCVVSVSTPSPPCSLPCSPGACVVLGGQAACSCPALFSGSLCQHYRCVDHCGPHARCHVLPENDHAHVGDHDLPPLTCTCYPGWTGERCDRQIEASDTRDNEAHTDDTRHEDRGGAHGAEDECARCENGASCERGPGGVTCRCTSQYTGPRCTECAGGAPGAACRQREAELCRDYCYNNGSCSLSAGAVAGERVAQCSCVAGWTGARCELRDDAAGGTAEWGSCTGSCAHGGRCVSGVAGGACACAGAWGGSRCRHYVGHDNACVARACAPPAVCVWKASDNPSEPGTPYCACSEGVQCSDTGVGAEGAGWGTAGGAALLALAAVLAVLLAALYVAHRRRHGAFVHARLSEGVGEGLEISNPMYLAGDDDHDTDTRDTRNNGGNHFANPIYDSMYAPQDTNPSEEQASLLEAPRRATP-