Monarch geneset OGS2.0

DPOGS203547
TranscriptDPOGS203547-TA819 bp
ProteinDPOGS203547-PA272 aa
Genomic positionDPSCF300055 + 398286-402782
RNAseq coverage1132x (Rank: top 11%)
Annotation
HeliconiusHMEL0132111e-8365.57% 
BombyxBGIBMGA000218-TA4e-1136.90% 
DrosophilaNf-YC-PA7e-3961.74% 
EBI UniRef50UniRef50_Q2F5X76e-8566.67%Nuclear Y/CCAAT-box binding factor C subunit NF/YC n=2 Tax=Obtectomera RepID=Q2F5X7_BOMMO
NCBI RefSeqNP_001093081.11e-8566.67%nuclear Y/CCAAT-box binding factor C subunit NF/YC [Bombyx mori]
NCBI nr blastpgi|1513011792e-8466.67%nuclear Y/CCAAT-box binding factor C subunit NF/YC [Bombyx mori]
NCBI nr blastxgi|1513011795e-9366.10%nuclear Y/CCAAT-box binding factor C subunit NF/YC [Bombyx mori]
Group
Gene OntologyGO:00036775.2e-34DNA binding
GO:00435654.8e-22sequence-specific DNA binding
GO:00056224.8e-22intracellular
KEGG pathwayame:4086152e-59 
 K08066 (NFYC)maps-> Antigen processing and presentation
InterPro domain[62-139] IPR0090725.2e-34Histone-fold
[62-124] IPR0039584.8e-22Transcription factor CBF/NF-Y/archaeal histone
Orthology groupMCL17268 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS203547-TA
ATGTCCGTGTGTTTCTTTGTGCCAGCCGACCAAGCCGGTACTTCGGCTGGTTCAGAGGAGACGGAGGTGGATGGGGCAGAGGACGTACCTCCTGAGAACATCCAGAGTACTCTCCAGGTGTTCTGGAACAAGGTCAATGAGGATATGAAGAAGATTAACTCGGAGGATTTCAAAACTCAAGTCCTGCCGCTCGCTCGCATAAAGAAGATCATGAAGCTGGATGAAGAGGTGAAGATGATATCGGCCGAGGCCCCGGTTTTGTTCGCGAAAGCTGCCGAGATATTCATACACGAACTGACGTTACGAGCGTGGTCTCATACTGAAGACAATAAGAGGAGGACGCTACAGCGTAATGACATAGCCATGGCTATATCTAAGTCTGATCAGTTCGACTTCCTCATAGACATCGTCCCCAGACACGAGGTGAAGCCGGCTCCAGCCAGGAGAGACGAGCCGAGGCATGAGACGGTACAACAGCCGCATCAGACTCCGATAACACAACCACAATTTGTCATTCAGCCGACGGCGCAGATAGTACAACAGCAACAGCAATCCAGCAGCACATCATCACAGCCCGTGCTGCTGCAGCAGGTGATGACTGGCTCCGGGGAAGTGCAGCCTTTACCGATCCAGTTGACCCAGGCCCAGCTGAACATGATTCGGCTCCAGGTGCAGAACAACCCCAACCAGCCGATCATCATACAGGCGCAACCCCAACCGCAGCAGTCGCCGCAAATCATACAGGTGTCGTCTCAAGCTCCACATCAGCCGCACCAAATATTCCTCACCCAAGTGGCGTCCGGTCAAGACGAGTCCTAG

Protein sequence:

>DPOGS203547-PA
MSVCFFVPADQAGTSAGSEETEVDGAEDVPPENIQSTLQVFWNKVNEDMKKINSEDFKTQVLPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEDNKRRTLQRNDIAMAISKSDQFDFLIDIVPRHEVKPAPARRDEPRHETVQQPHQTPITQPQFVIQPTAQIVQQQQQSSSTSSQPVLLQQVMTGSGEVQPLPIQLTQAQLNMIRLQVQNNPNQPIIIQAQPQPQQSPQIIQVSSQAPHQPHQIFLTQVASGQDES-