DPOGS203547 | ||
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Transcript | DPOGS203547-TA | 819 bp |
Protein | DPOGS203547-PA | 272 aa |
Genomic position | DPSCF300055 + 398286-402782 | |
RNAseq coverage | 1132x (Rank: top 11%) |
Annotation | ||||
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Heliconius | HMEL013211 | 1e-83 | 65.57% |   |
Bombyx | BGIBMGA000218-TA | 4e-11 | 36.90% |   |
Drosophila | Nf-YC-PA | 7e-39 | 61.74% |   |
EBI UniRef50 | UniRef50_Q2F5X7 | 6e-85 | 66.67% | Nuclear Y/CCAAT-box binding factor C subunit NF/YC n=2 Tax=Obtectomera RepID=Q2F5X7_BOMMO |
NCBI RefSeq | NP_001093081.1 | 1e-85 | 66.67% | nuclear Y/CCAAT-box binding factor C subunit NF/YC [Bombyx mori] |
NCBI nr blastp | gi|151301179 | 2e-84 | 66.67% | nuclear Y/CCAAT-box binding factor C subunit NF/YC [Bombyx mori] |
NCBI nr blastx | gi|151301179 | 5e-93 | 66.10% | nuclear Y/CCAAT-box binding factor C subunit NF/YC [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0003677 | 5.2e-34 | DNA binding | |
GO:0043565 | 4.8e-22 | sequence-specific DNA binding | ||
GO:0005622 | 4.8e-22 | intracellular | ||
KEGG pathway | ame:408615 | 2e-59 |   | |
  | K08066 (NFYC) | maps-> | Antigen processing and presentation | |
InterPro domain | [62-139] IPR009072 | 5.2e-34 | Histone-fold | |
[62-124] IPR003958 | 4.8e-22 | Transcription factor CBF/NF-Y/archaeal histone | ||
Orthology group | MCL17268 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS203547-TA
ATGTCCGTGTGTTTCTTTGTGCCAGCCGACCAAGCCGGTACTTCGGCTGGTTCAGAGGAGACGGAGGTGGATGGGGCAGAGGACGTACCTCCTGAGAACATCCAGAGTACTCTCCAGGTGTTCTGGAACAAGGTCAATGAGGATATGAAGAAGATTAACTCGGAGGATTTCAAAACTCAAGTCCTGCCGCTCGCTCGCATAAAGAAGATCATGAAGCTGGATGAAGAGGTGAAGATGATATCGGCCGAGGCCCCGGTTTTGTTCGCGAAAGCTGCCGAGATATTCATACACGAACTGACGTTACGAGCGTGGTCTCATACTGAAGACAATAAGAGGAGGACGCTACAGCGTAATGACATAGCCATGGCTATATCTAAGTCTGATCAGTTCGACTTCCTCATAGACATCGTCCCCAGACACGAGGTGAAGCCGGCTCCAGCCAGGAGAGACGAGCCGAGGCATGAGACGGTACAACAGCCGCATCAGACTCCGATAACACAACCACAATTTGTCATTCAGCCGACGGCGCAGATAGTACAACAGCAACAGCAATCCAGCAGCACATCATCACAGCCCGTGCTGCTGCAGCAGGTGATGACTGGCTCCGGGGAAGTGCAGCCTTTACCGATCCAGTTGACCCAGGCCCAGCTGAACATGATTCGGCTCCAGGTGCAGAACAACCCCAACCAGCCGATCATCATACAGGCGCAACCCCAACCGCAGCAGTCGCCGCAAATCATACAGGTGTCGTCTCAAGCTCCACATCAGCCGCACCAAATATTCCTCACCCAAGTGGCGTCCGGTCAAGACGAGTCCTAG
>DPOGS203547-PA
MSVCFFVPADQAGTSAGSEETEVDGAEDVPPENIQSTLQVFWNKVNEDMKKINSEDFKTQVLPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEDNKRRTLQRNDIAMAISKSDQFDFLIDIVPRHEVKPAPARRDEPRHETVQQPHQTPITQPQFVIQPTAQIVQQQQQSSSTSSQPVLLQQVMTGSGEVQPLPIQLTQAQLNMIRLQVQNNPNQPIIIQAQPQPQQSPQIIQVSSQAPHQPHQIFLTQVASGQDES-