DPOGS203597 | ||
---|---|---|
Transcript | DPOGS203597-TA | 483 bp |
Protein | DPOGS203597-PA | 160 aa |
Genomic position | DPSCF300063 - 655062-656360 | |
RNAseq coverage | 6770x (Rank: top 2%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL008886 | 7e-85 | 88.54% |   |
Bombyx | BGIBMGA007267-TA | 7e-79 | 83.75% |   |
Drosophila | Pdsw-PA | 3e-58 | 64.14% |   |
EBI UniRef50 | UniRef50_Q1HPL8 | 9e-77 | 83.75% | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 n=18 Tax=Pancrustacea RepID=NDUBA_BOMMO |
NCBI RefSeq | NP_001040478.1 | 2e-77 | 83.75% | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 [Bombyx mori] |
NCBI nr blastp | gi|114052454 | 3e-76 | 83.75% | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 [Bombyx mori] |
NCBI nr blastx | gi|114052454 | 2e-78 | 83.75% | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 [Bombyx mori] |
Group | ||||
---|---|---|---|---|
KEGG pathway | aag:AaeL_AAEL001865 | 3e-58 |   | |
  | K03966 (NDUFB10) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Parkinson's disease | |
InterPro domain | [26-151] IPR019377 | 1.4e-61 | NADH-ubiquinone oxidoreductase, subunit 10 | |
Orthology group | MCL13710 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS203597-TA
ATGGTTCAAAAAGGGGAATCTCCTCCCGATGATAATCTTTTTAGAGGATTTATATCAGCTTTGTACAACACCCTAGATGTTCCTGTAACCTGGTTCAGAGAAAAAGTTGTTGAACCAAATCAGAAAAAGTATCCGTGGTACCATCAGCAATACCGCCGTGTACCGACCATCGATCAATGTTATAGCGACGATGTTGTTTGCGACTTTGAAGCCAATTTGCAATTCAAGCGTGATAGAGCTGTGGATTCCGAAATCTTGAACATTCTCCGTATGCGCTATGAAGATTGTATGATGTATGAAAGCCCAGATCACCTCACCACTTGCAAACCTCTGTGGGAAAAATACAAGAACGCTGAAGAAGCTTGGTTCATTAAGTATGGTGATCTGGGAGCGTATGCTGATGCAAGGAAGGCATACATGAAACAAAAGCATCGCATGATCTGGGAGAGACGTCACGGACCTTTGTCCGATCAGACCAAGTGA
>DPOGS203597-PA
MVQKGESPPDDNLFRGFISALYNTLDVPVTWFREKVVEPNQKKYPWYHQQYRRVPTIDQCYSDDVVCDFEANLQFKRDRAVDSEILNILRMRYEDCMMYESPDHLTTCKPLWEKYKNAEEAWFIKYGDLGAYADARKAYMKQKHRMIWERRHGPLSDQTK-