DPOGS203700 | ||
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Transcript | DPOGS203700-TA | 903 bp |
Protein | DPOGS203700-PA | 300 aa |
Genomic position | DPSCF300010 - 1627117-1628737 | |
RNAseq coverage | 1969x (Rank: top 6%) |
Annotation | ||||
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Heliconius | HMEL012503 | 6e-161 | 86.33% |   |
Bombyx | BGIBMGA003493-TA | 4e-150 | 78.67% |   |
Drosophila | Sc2-PA | 1e-108 | 58.61% |   |
EBI UniRef50 | UniRef50_B0WGJ0 | 2e-111 | 62.79% | Synaptic glycoprotein SC2 n=2 Tax=Neoptera RepID=B0WGJ0_CULQU |
NCBI RefSeq | XP_001601952.1 | 7e-120 | 65.12% | PREDICTED: similar to GA10597-PA [Nasonia vitripennis] |
NCBI nr blastp | gi|156543298 | 1e-118 | 65.12% | PREDICTED: trans-2,3-enoyl-CoA reductase-like [Nasonia vitripennis] |
NCBI nr blastx | gi|156543298 | 4e-119 | 65.12% | PREDICTED: trans-2,3-enoyl-CoA reductase-like [Nasonia vitripennis] |
Group | ||||
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Gene Ontology | GO:0016627 | 1.5e-31 | oxidoreductase activity, acting on the CH-CH group of donors | |
GO:0016021 | 1.5e-31 | integral to membrane | ||
GO:0005737 | 1.5e-31 | cytoplasm | ||
GO:0006629 | 1.5e-31 | lipid metabolic process | ||
GO:0005515 | 8.8e-10 | protein binding | ||
KEGG pathway | nvi:100113603 | 2e-119 |   | |
  | K10258 (TER) | maps-> | Biosynthesis of unsaturated fatty acids | |
InterPro domain | [149-300] IPR001104 | 1.5e-31 | 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal | |
[15-75] IPR000626 | 8.8e-10 | Ubiquitin | ||
Orthology group | MCL13413 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS203700-TA
ATGGAGATTGAAATATTAAGCGTATCCGGTTCCAAACCACTGGGAAAAATACGTGTGAATGAGGATGCCACAGTTCAAGATGTGAAGGAAAAGATTCATCAAGGTTTAAAAAAATCTATGTATCCTGAAAGACAATCCATCAAACTGGAATCTAAAGGAAGGTCACTTAAAGACGAGACGACTCTGAAATCTCTCAACATAGGTGACGGAGCGAAATTGTATTTACAAGATCTTGGACCACAAATCTCTTGGCGTAATGTCTTCCTAGCTGAATACGCCGGTCCTCTGTTTGTTTACTTATGGGTATATCAAAGACCCTGGATCCTTTATGGTGATGTTACATCAGCCCCGGGAACAGTCGCTTCTGTTGCAGCAATTTGTTGGTCTCTACATTATGCCAAGCGACTTCTTGAGACTGTGTTTGTCCATCGATTCTCAAAGGGAACAATGCCTCTTCGGAATCTTTTCAAAAACTGTTCATATTACTGGTTATTCACCCTATACATTGCATACCACATTAATCACCCACTTTTCACTGCCCCTTGCAACACATGTTTATATGTTGGAGTAGCAGGTTTTACTATCTGTGAATTGGGTAACTTAAGCATTCACATCCTATTGAAGAACTTGAGACCACCGGGCACTAAAGTGAGGCGCATCCCCAAACCAGACGGCAACCCATTCTCCATACTTTTCAACTTTGTTTCTTGTCCCAATTATACTTACGAGTTTGGATCATGGTTCTTCTTCACAGTATTGACCAAATGTCTTCCAGCTGGTTTGTTTGCATTGGTTGGGTTATATCAGATGTCAGTATGGGCTATTGGAAAGCACCGTAATTACAAGAAGGAATTCCCCGACTATCCAAAAGGCCGCAAAGCCATTCTACCATTTATTCTCTAA
>DPOGS203700-PA
MEIEILSVSGSKPLGKIRVNEDATVQDVKEKIHQGLKKSMYPERQSIKLESKGRSLKDETTLKSLNIGDGAKLYLQDLGPQISWRNVFLAEYAGPLFVYLWVYQRPWILYGDVTSAPGTVASVAAICWSLHYAKRLLETVFVHRFSKGTMPLRNLFKNCSYYWLFTLYIAYHINHPLFTAPCNTCLYVGVAGFTICELGNLSIHILLKNLRPPGTKVRRIPKPDGNPFSILFNFVSCPNYTYEFGSWFFFTVLTKCLPAGLFALVGLYQMSVWAIGKHRNYKKEFPDYPKGRKAILPFIL-