| DPOGS203718 | ||
|---|---|---|
| Transcript | DPOGS203718-TA | 735 bp |
| Protein | DPOGS203718-PA | 244 aa |
| Genomic position | DPSCF300010 - 1150756-1153398 | |
| RNAseq coverage | 41x (Rank: top 72%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005951 | 7e-88 | 67.70% | |
| Bombyx | BGIBMGA003691-TA | 5e-76 | 73.84% | |
| Drosophila | CG5703-PA | 3e-64 | 50.67% | |
| EBI UniRef50 | UniRef50_P19404 | 2e-65 | 54.72% | NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial n=94 Tax=cellular organisms RepID=NDUV2_HUMAN |
| NCBI RefSeq | NP_001040535.1 | 1e-65 | 54.19% | NADH-ubiquinone reductase [Bombyx mori] |
| NCBI nr blastp | gi|338728030 | 4e-65 | 55.19% | PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial-like [Equus caballus] |
| NCBI nr blastx | gi|338728030 | 6e-63 | 55.19% | PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial-like [Equus caballus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0051287 | 1.2e-96 | NAD binding | |
| GO:0055114 | 1.2e-96 | oxidation-reduction process | ||
| GO:0016491 | 1.2e-96 | oxidoreductase activity | ||
| KEGG pathway | ecb:100054445 | 8e-66 | ||
| K03943 (NDUFV2) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [15-240] IPR002023 | 1.2e-96 | NADH:ubiquinone oxidoreductase, 24kDa subunit | |
| [45-221] IPR012336 | 3.1e-45 | Thioredoxin-like fold | ||
| Orthology group | MCL24934 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203718-TA
ATGTTCAAAATTATTGATCTTATCAAGAATCCTCGATTGAATAGAAACATTTGTACTTCAGGAAGGTTATGGAGTGAAGAGCTTTTTGCTCACAGAGACAGTAAAGAAAACAATCCCAATACGCCATTTGACTTTTCTCAAGCAAATTTAAGGAGACTAACAGCTATTATTCAAAATTATCCCGAAGGGGCTCAGCGTTCTGCGCTTGGAGCAGCAATGGATATTGTTCAAAGGCAAATCGGATGGATACCCATATCAGCTATGCACAAAGTGGCCGATATTCTCAGTATTCCCCGTATGAGAGTATACGAATGGGCTACATTCTATACTATGAATAAAAGAAGATTCCGGGGAAAATTCAATGTGAAAGTTTGTATAACGACTCCTTGTATGCTGCGTGGATCGGACATCATTTTAGCAGCGGCAGAAGCGGCAACCCGCTGCCGTGTGGGAGGTCTCTCCAGTGACAAAATGTTCGGCGTGGATGTCGTGCAATGCCAGGGCGCGTGTGTCAATGCACCCGTTCTCGTTGTAGACGACGATTATTATGAAGATGTTACTGTATGTGATGTGAATGAAATTATACAGACTTTAAGAAATGGAGGTATACCACCTTGGGGCCCTCGCTCCGGTAGGACTTCCTGTGAACCAATAACAGGCCAAACGACCTTATGTGAATATCCTCCTCAACCAGGCTATGGTCTCCAACCATCTTTATGTGGCCGGTGCAATTAG
>DPOGS203718-PA
MFKIIDLIKNPRLNRNICTSGRLWSEELFAHRDSKENNPNTPFDFSQANLRRLTAIIQNYPEGAQRSALGAAMDIVQRQIGWIPISAMHKVADILSIPRMRVYEWATFYTMNKRRFRGKFNVKVCITTPCMLRGSDIILAAAEAATRCRVGGLSSDKMFGVDVVQCQGACVNAPVLVVDDDYYEDVTVCDVNEIIQTLRNGGIPPWGPRSGRTSCEPITGQTTLCEYPPQPGYGLQPSLCGRCN-