Monarch geneset OGS2.0

DPOGS203791
TranscriptDPOGS203791-TA2583 bp
ProteinDPOGS203791-PA860 aa
Genomic positionDPSCF300010 + 1541358-1553317
RNAseq coverage592x (Rank: top 21%)
Annotation
HeliconiusHMEL0125130.085.84% 
BombyxBGIBMGA003697-TA0.073.30% 
DrosophilaSema-1b-PC3e-11739.93% 
EBI UniRef50UniRef50_Q264735e-15349.41%Semaphorin-1A n=4 Tax=Neoptera RepID=SEM1A_SCHAM
NCBI RefSeqXP_002423485.12e-14747.74%Semaphorin-1A precursor, putative [Pediculus humanus corporis]
NCBI nr blastpgi|81346782e-15249.41%fasciclin IV [Schistocerca americana]
NCBI nr blastxgi|81346782e-14950.00%fasciclin IV [Schistocerca americana]
Group
Gene OntologyGO:00055152.3e-140protein binding
GO:00160209.5e-12membrane
GO:00072759.5e-12multicellular organismal development
GO:00048729.5e-12receptor activity
KEGG pathwayaag:AaeL_AAEL0030632e-142 
 K06842 (SEMA6)maps-> Axon guidance
InterPro domain[46-591] IPR0016272.3e-140Semaphorin/CD100 antigen
[278-608] IPR0159433.1e-109WD40/YVTN repeat-like-containing domain
[609-665] IPR0162019.5e-12Plexin-like fold
[609-663] IPR0036593.8e-07Plexin/semaphorin/integrin
[609-640] IPR0021651.3e-06Plexin
Orthology groupMCL16911 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS203791-TA
ATGGCCGTCGCCAGGGCGGTCCTCATACTGCTAGCATCCACCGCCCAAGCGTGGATGCCCGACGCAAACGCTCGAATCCATATCAAATATGGCGATGAAACTACGGAGCAGTTTGTGGGCAATACGACAGGACCAAACCACTTCCGTATTTTAGACAAAGACGACTTCTCTATTTTAGTAGGGGGCAGGAGTACGGTCTATAATCTCAGCCTCTACGATTTATCGGAAAATGTAGAACAGCGAATAGAATGGCAATCTACTGTCGCACATCGAGAGCTATGTCTAATAAAGGGAAAATCGGCGGACGATTGCCAAAACTATCTGCGAGTGGCGACTAGGGCTCACGGGCGATTGCTGGTCTGTGGAACCAACGCTTTCAAACCCATGTGCCGGAGGTACGCCAGGCATCCCCCCAACCACTCGCTCGAAGAGTTCGATGGAACCGGCAGATGTCCATACAACCCGCAACACAATTCAACTGCCATATTCACAGATGGTCATCTATATACTGCGACGGCTGCAGATTTTTCGGGCTCCGAACCCTTAATATACCGAGAACCAGTAAGGACCGAACACTCAGATTTACGATTATTAAACGATCCCTCATTTGTCGGAGCAGTGGCTTCAACGAGCCACGTTTACTTCTTTTATCGTGAGACTGCTGTCGAGTACATGAACTGCGGAAAGTCGGTATATTCGAGGGTCGCAAGAGTATGTCTAAATGATAAAGGTGGTCCACACCCTTTTAACGATAGATGGACATCATTTCTCAAAGCCCGACTAAACTGCTCAATACCTGGGGAATATCCGTTCTACTTCGATGAAATACATGGTCATCTATATACTGCGACGGCTGCAGATTTTTCGGGCTCCGAACCCTTAATATACCGAGAACCAGTAAGGACCGAACACTCAGATTTACGATTATTAAACGATCCCTCATTTGTCGGAGCAGTGGCTTCAACGAGCCACGTTTACTTCTTTTATCGTGAGACTGCTGTCGAGTACATGAACTGCGGAAAGTCGGTATATTCGAGGGTCGCAAGAGTATGTCTAAATGATAAAGGTGGTCCACACCCTTTTAACGATAGATGGACATCATTTCTCAAAGCCCGACTAAACTGCTCAATACCTGGGGAATATCCGTTCTACTTCGATGAAATACAAGCTACTACTGAAATTATTAATGGTGTTTATGGCAACGGCGGTAACAGGAATGATATAGTTTATGCTGTGTTTACAACACCACAAAACGCAATCGGTGGTTCGGCAGTATGTGCATTTGCGATGAGAGATATTTTAGACGCTTTCGAAGGACCATTTAAAGGACAGAAAAATATGAACTCGAACTGGCTACAATTGCCAAAAGAAAAAGTTCCCCAACCACCGCAACCAGGGTCGTGCGTAGAAGATAGTAGAACACTTTCGGATTCAGCCATCAATTTTATTAAAACACATCCACTGATGGATAAAGCTGTTCCGTCATTTTTAGCACGACCGATTCTTATAAGAGTCAGTTTACAGTATAGGTTTTCAGCGATCGCTATCCACCCTCAAGTGCAGTCAATGAATGGCAACAAATACGACGTTATGTACGTCGGTACAGATGACGGCAGGGTCATAAAAGCTGTGAATGTAGCTTCTAACGAGGGCGTATTCGATGCTAGTATGGATGAATATGGTAAAAATCCAGTAAGAACAGCAGTAATATCCGAGGTCCAAGTACTGCCACCCGGCGTACCAATCAAACAAATGCATGTAGCTCTCACTACCGAGAAGTTAATCGTATCTTCCGGCGACATGATAAAAGCCATAACGTTATCTCACTGTGCTAACGTGCAATCGTGCAGAGAATGCGTGGGACTGCAAGATCCTCATTGTGCTTGGGATTCCAAACAGCAGCAATGCTCTTGGGTTGGAAACAGACAATTTCCAAATCCGGAAAGATTTTTACAAAACATAGAAACCGGCAAGACTGATATTTGCAATAAATTACCTAGTTTATTACCGAGTGACCGTCACGCGAACCGAAATCCTGTAACGAAAAAGCCTCAGTCCGACCCGAATCCACATCAACCAAATAACGATATACAAAATGAAATTCTTATTGAAGTAGTCGAAACTAACGTCCTGTCTGAAGACAAAGACACTAGCAATAATAAGCACGAAACAGATTTACTAACAGTCGAAGCAGCGGGCAACATCTACAGTGCTCAGGCGTTGCTTACCGCGGTAGTCGCCTCCTGTCTCGTCACTCTCATGGTCGGCTTCGTCATCGGATACCTCTTCTCCAGAAGATTCAGACACCCTTTCTTCACTGACACCTCTCCCTTTAATGAGCAGCATAATCAATTGAATCGACTGAGCCCATTAGAAACGCCTTTAAATGTGAACTCGGGCTACATGCCGCCGAGGTCAAAAAACGTGAACATTGTAGCTAATGTTTGCCCTCTAGCAAAGCAGGACAATCTGCATCTCGAGCTGGGTAAAGAACGGACTCTCGACCTTCGCAACTCCACCGAGTCCCTCGACAAGGACCTCAAGTGTGGTACCCTACAAAAAGTCAAAAAGACTTACATATGA

Protein sequence:

>DPOGS203791-PA
MAVARAVLILLASTAQAWMPDANARIHIKYGDETTEQFVGNTTGPNHFRILDKDDFSILVGGRSTVYNLSLYDLSENVEQRIEWQSTVAHRELCLIKGKSADDCQNYLRVATRAHGRLLVCGTNAFKPMCRRYARHPPNHSLEEFDGTGRCPYNPQHNSTAIFTDGHLYTATAADFSGSEPLIYREPVRTEHSDLRLLNDPSFVGAVASTSHVYFFYRETAVEYMNCGKSVYSRVARVCLNDKGGPHPFNDRWTSFLKARLNCSIPGEYPFYFDEIHGHLYTATAADFSGSEPLIYREPVRTEHSDLRLLNDPSFVGAVASTSHVYFFYRETAVEYMNCGKSVYSRVARVCLNDKGGPHPFNDRWTSFLKARLNCSIPGEYPFYFDEIQATTEIINGVYGNGGNRNDIVYAVFTTPQNAIGGSAVCAFAMRDILDAFEGPFKGQKNMNSNWLQLPKEKVPQPPQPGSCVEDSRTLSDSAINFIKTHPLMDKAVPSFLARPILIRVSLQYRFSAIAIHPQVQSMNGNKYDVMYVGTDDGRVIKAVNVASNEGVFDASMDEYGKNPVRTAVISEVQVLPPGVPIKQMHVALTTEKLIVSSGDMIKAITLSHCANVQSCRECVGLQDPHCAWDSKQQQCSWVGNRQFPNPERFLQNIETGKTDICNKLPSLLPSDRHANRNPVTKKPQSDPNPHQPNNDIQNEILIEVVETNVLSEDKDTSNNKHETDLLTVEAAGNIYSAQALLTAVVASCLVTLMVGFVIGYLFSRRFRHPFFTDTSPFNEQHNQLNRLSPLETPLNVNSGYMPPRSKNVNIVANVCPLAKQDNLHLELGKERTLDLRNSTESLDKDLKCGTLQKVKKTYI-