DPOGS203805 | ||
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Transcript | DPOGS203805-TA | 435 bp |
Protein | DPOGS203805-PA | 144 aa |
Genomic position | DPSCF300010 + 1743762-1744317 | |
RNAseq coverage | 211x (Rank: top 46%) |
Annotation | ||||
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Heliconius | HMEL013306 | 1e-32 | 52.48% |   |
Bombyx | BGIBMGA009620-TA | 1e-06 | 34.55% |   |
Drosophila | CG10981-PA | 1e-10 | 33.33% |   |
EBI UniRef50 | UniRef50_D6WN83 | 4e-11 | 47.46% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WN83_TRICA |
NCBI RefSeq | XP_564794.2 | 2e-10 | 44.64% | AGAP007458-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|270006601 | 1e-10 | 47.46% | hypothetical protein TcasGA2_TC010896 [Tribolium castaneum] |
NCBI nr blastx | gi|66822495 | 5e-11 | 44.93% | MEK1 interacting protein 1 [Dictyostelium discoideum AX4] |
Group | ||||
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Gene Ontology | GO:0005515 | 1.3e-06 | protein binding | |
GO:0008270 | 1.3e-06 | zinc ion binding | ||
KEGG pathway | dre:100037391 | 1e-06 |   | |
  | K10143 (RFWD2, COP1) | maps-> | Ubiquitin mediated proteolysis | |
  |   |   | p53 signaling pathway | |
InterPro domain | [85-135] IPR013083 | 1.8e-14 | Zinc finger, RING/FYVE/PHD-type | |
[87-126] IPR018957 | 1.3e-07 | Zinc finger, C3HC4 RING-type | ||
[87-126] IPR001841 | 1.3e-06 | Zinc finger, RING-type | ||
Orthology group | MCL22431 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS203805-TA
ATGGATAACGATTTCAAAGATGATATTATTGATCTCACGGGCTCTATGACATGTGCTCTTCAATGTACATTGTCTAATGTAGTTATAGACCTGGTTACAACTGATGAATCATTTTATGATTCTTCTGTAGATGCAGATGTATCACAAAGTCCAGTGAAATTAAAAAGTTGTAAACGCAAAGGTAATTCCCAGTGTGCTGATATACCACCAAAGAAAAAATCTGATGGCTACAAGAACAAATCAAATTCATTTGGTGAATGCCCTATATGTTGGGAGGCTTTGGGTAAAAACCCTTTGGCATCAACAAAATGTGGGCATGTATATTGTATGAAATGTATAGAAAGATCCTTACAAAGTGAGAAAAAATGTCCAACATGCCGAAGTAGCTTGAAAGGAAAAGCAGCTTACCATCCTTTATACTTATCTAAAAATTGA
>DPOGS203805-PA
MDNDFKDDIIDLTGSMTCALQCTLSNVVIDLVTTDESFYDSSVDADVSQSPVKLKSCKRKGNSQCADIPPKKKSDGYKNKSNSFGECPICWEALGKNPLASTKCGHVYCMKCIERSLQSEKKCPTCRSSLKGKAAYHPLYLSKN-