| DPOGS203816 | ||
|---|---|---|
| Transcript | DPOGS203816-TA | 795 bp |
| Protein | DPOGS203816-PA | 264 aa |
| Genomic position | DPSCF300010 + 2216514-2218376 | |
| RNAseq coverage | 1858x (Rank: top 7%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013327 | 6e-117 | 80.68% | |
| Bombyx | BGIBMGA003475-TA | 2e-101 | 76.60% | |
| Drosophila | eEF1delta-PB | 3e-65 | 58.91% | |
| EBI UniRef50 | UniRef50_Q7QB17 | 2e-76 | 59.26% | AGAP004235-PA n=26 Tax=Opisthokonta RepID=Q7QB17_ANOGA |
| NCBI RefSeq | NP_001036853.1 | 5e-100 | 76.60% | elongation factor 1 delta [Bombyx mori] |
| NCBI nr blastp | gi|112983886 | 9e-99 | 76.60% | elongation factor 1 delta [Bombyx mori] |
| NCBI nr blastx | gi|112983886 | 2e-106 | 76.60% | elongation factor 1 delta [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003746 | 9e-39 | translation elongation factor activity | |
| GO:0006414 | 9e-39 | translational elongation | ||
| GO:0005853 | 9e-39 | eukaryotic translation elongation factor 1 complex | ||
| KEGG pathway | ||||
| InterPro domain | [171-264] IPR014717 | 1.5e-43 | Translation elongation factor EF1B/ribosomal protein S6 | |
| [178-264] IPR014038 | 9e-39 | Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange | ||
| [142-169] IPR018940 | 3.5e-14 | Elongation factor 1 beta central acidic region, eukaryote | ||
| Orthology group | MCL15752 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203816-TA
ATGTCTGCCTTAGTACACGAAAAAGTTTGGCTCGATAAAACCGCTTATAATGATGCCGAAAGAAACTACTACGAATCACTATCAAAAGGAAAAATTCCCTCCATTGGTGTTGGGGCTACATCATCTTTGGCCAGTGAGGTAGCTAAAGCTAGACAGCATATCAAAAACTCACTGGAATGTATGGACAATGTTGCTTCATTAAGTGGAGTACCAAATACTGAAATTAACAACAAACTTAACTCTTTGGAGAAAGAGAACTCGGACCTCAAAAAAGCAGTTGATGATCTCCGCAAATTGGTTATTAGTCTACAAGCACGAGTCGAATCATTGGAAGCGTCTGAACCCAGTGTATCCAAATCTGCAGCTCCTAAGGCCGCAGCGCCTGCCCCAGCCCCTGCTGAGGACTCAGATGATGGAGTAGATTTGTTTGGGTCTGATGATGAAGAGGAAAGTGCTGAAGCTGCAAAACTAAGAGAGGAGCGGCTAGCGGCATATAATGCAAAGAAATCCAAAAAACCAGTCCTCATTGCAAAGTCCAACATTATACTTGATGTAAAGCCTTGGGACGATGAAACAGACATGAAAGCTATGGAAGATGCTGTCAGAACAATCAGCATTGATGGTCTATTGTGGGGTGCTGCAAAACTAGTACCATTAGCTTTTGGTATTCACAAGTTGCAAATATCCTGCGTTGTTGAAGATGACAAGGTGTCAATCGATTGGCTGACTGAAGAAATTGAAAAATTGGAGGACTTTGTTCAAAGTGTTGATATTGCTGCCTTCAACAAAGTTTAA
>DPOGS203816-PA
MSALVHEKVWLDKTAYNDAERNYYESLSKGKIPSIGVGATSSLASEVAKARQHIKNSLECMDNVASLSGVPNTEINNKLNSLEKENSDLKKAVDDLRKLVISLQARVESLEASEPSVSKSAAPKAAAPAPAPAEDSDDGVDLFGSDDEEESAEAAKLREERLAAYNAKKSKKPVLIAKSNIILDVKPWDDETDMKAMEDAVRTISIDGLLWGAAKLVPLAFGIHKLQISCVVEDDKVSIDWLTEEIEKLEDFVQSVDIAAFNKV-