| DPOGS203820 | ||
|---|---|---|
| Transcript | DPOGS203820-TA | 381 bp |
| Protein | DPOGS203820-PA | 126 aa |
| Genomic position | DPSCF300010 + 2254796-2255552 | |
| RNAseq coverage | 316x (Rank: top 36%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013332 | 2e-69 | 97.62% | |
| Bombyx | % | |||
| Drosophila | CG13298-PA | 3e-54 | 77.31% | |
| EBI UniRef50 | UniRef50_Q7QCS0 | 2e-57 | 80.95% | AGAP002780-PA n=7 Tax=Eukaryota RepID=Q7QCS0_ANOGA |
| NCBI RefSeq | NP_001037588.1 | 1e-67 | 96.83% | 14 kDa subunit splicing factor 3b [Bombyx mori] |
| NCBI nr blastp | gi|112982994 | 3e-66 | 96.83% | 14 kDa subunit splicing factor 3b [Bombyx mori] |
| NCBI nr blastx | gi|112982994 | 4e-65 | 96.83% | 14 kDa subunit splicing factor 3b [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0000166 | 1.5e-17 | nucleotide binding | |
| GO:0003676 | 1.2e-15 | nucleic acid binding | ||
| KEGG pathway | aag:AaeL_AAEL005909 | 1e-60 | ||
| K12833 (SF3B14) | maps-> | Spliceosome | ||
| InterPro domain | [18-96] IPR012677 | 1.5e-17 | Nucleotide-binding, alpha-beta plait | |
| [20-90] IPR000504 | 1.2e-15 | RNA recognition motif domain | ||
| Orthology group | MCL12824 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203820-TA
ATGGCACTAGCTCTTCAAAGGCGGGCAAATGTGAGGCTGCCTCCAGAGGTTAATAGGATATTATATATCAGAAATTTACCATATAAAATTTCAGCTGAAGAAATGTATGATATATTCGGAAAATATGGAGCTATTCGACAAATAAGAGTTGGAAATACTCCTGAAACCAGAGGAACCGCCTTTGTAGTATATGAGGATATATTTGATGCCAAAAATGCATGTGATCATTTATCTGGATTTAATGTTTGCAATCGGTATTTAGTTGTACTTTACTACAGATCAAATAAAGCATTTAAGGGTATGGATATTGAAAAGAAACAAGAAGAATTAGATACACTGAAAAAGAAATATGGAATTTCATCTGATGATTTAAGGAAATAA
>DPOGS203820-PA
MALALQRRANVRLPPEVNRILYIRNLPYKISAEEMYDIFGKYGAIRQIRVGNTPETRGTAFVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYRSNKAFKGMDIEKKQEELDTLKKKYGISSDDLRK-