Monarch geneset OGS2.0

DPOGS203821
TranscriptDPOGS203821-TA1833 bp
ProteinDPOGS203821-PA610 aa
Genomic positionDPSCF300010 + 2270077-2272779
RNAseq coverage17922x (Rank: top 1%)
Annotation
HeliconiusHMEL0133340.090.98% 
BombyxBGIBMGA003469-TA0.094.20% 
DrosophilapAbp-PH0.065.83% 
EBI UniRef50UniRef50_P119400.069.24%Polyadenylate-binding protein 1 n=220 Tax=Metazoa RepID=PABP1_HUMAN
NCBI RefSeqNP_001091823.10.091.23%poly A binding protein [Bombyx mori]
NCBI nr blastpgi|1482986950.091.23%poly A binding protein [Bombyx mori]
NCBI nr blastxgi|1482986950.091.23%poly A binding protein [Bombyx mori]
Group
Gene OntologyGO:00037233.1e-238RNA binding
GO:00001668.3e-31nucleotide binding
GO:00036765e-25nucleic acid binding
KEGG pathway 
InterPro domain[11-598] IPR0065153.1e-238Polyadenylate binding protein, human types 1, 2, 3, 4
[486-607] IPR0020043.1e-47Polyadenylate-binding protein/Hyperplastic disc protein
[291-377] IPR0126778.3e-31Nucleotide-binding, alpha-beta plait
[297-368] IPR0005045e-25RNA recognition motif domain
Orthology groupMCL10294 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS203821-TA
ATGAATCCTGGACCACCAAATTATCCAATGGCATCGCTATATGTCGGGGACTTGCACTCCGACATCACCGAGGCCATGTTGTTTGAAAAATTTTCTCCTGCTGGTCCTGTTCTCTCTATTCGCGTATGCAGAGATATGATAACTCGTAGGTCTCTTGGCTACGCTTACGTAAATTTTCAGCAGCCTTCTGATGCCGAAAGAGCACTAGACACTATGAATTTTGATATGATCAAAGGTAGGCCAATTAGAATTATGTGGTCCCAAAGAGATCCATCCCTCCGCAAATCTGGAGTTGGAAATGTTTTTATTAAAAATCTTGACAAAGCCATAGATAACAAGGCCATGTATGATACATTCTCTGCTTTTGGCAATATATTGAGTTGTAAGGTAGCTCAAGATGAAAATGGGGCATCTAAGGGATATGGTTTTGTTCACTTTGAAACAGAAGAAGCTGCTAATAAATCCATTGAAAAAGTAAATGGAATGTTGCTAAATGGAAAAAAGGTTTACGTAGGCAGATTTATCCCTCGTAAGGAACGCGAAAAGGAACTGGGAGAGAAAGCTAAATTGTTCACTAATGTTTACGTCAAGAACTTCGGCGAAGATTTCTCGGATGAAATGCTAAGAGATATGTTTGAAAAATATGGCAGAATAACTAGCCATAAAGTAATGTATAAAGAGGATGGCTCATCCAGAGGTTTTGGTTTTGTAGCCTTTGAAGATCCAGATGCTGCCGAAAGGGCATGTCTTGAGCTTAATGGCAAAGAACTTGTTGAAGGAAAACCTCTATATGTAGGACGTGCTCAGAAGAAAGCTGAACGCCAAAAAGAACTAAAGCGTAAATTTGAGCAGTTAAAATCTGAACGTTTGACTCGTTATCAAGGAGTTAATCTGTATGTGAAGAATTTGGATGACACAATTGATGATGAGAGACTCCGTAAGGAATTTGCACCATTTGGTACTATTACTTCAGCCAAGGTTATGTTGGAAGATGGTCGTAGCAAAGGGTTTGGGTTTGTATGTTTCTCATCTCCTGAAGAAGCTACTAAAGCTGTTACTGAAATGAATGGAAGAATTGTAGGTACTAAACCTCTTTATGTAGCTCTTGCTCAAAGGAAAGAAGACCGCAAAGCTCATTTGACTTCACAATACATGCAACGCATGGCAAGTATGAGAATGCAACAAATGGGTCAAATATTCCAACCAGGCAGTGCTGGAGGTTACTTCGTCCCAACTATTCCCCCAGCCCAAAGATTCTATGGCCCTGCTCAAATTACTCAGATGAGACCTTCACAGAGATGGACTGCACAGCCTCCTGTAAGACCCAGCACTCAAACTGCTGCCTCAGCATATCCAAACATGCAAGCACCATTTAGACCCACTACACGTGGACCAACTCAAACAGCTTTGCGCACTTCTCTTGGAGCTAGACCTATAACAGGTCAACAGGGTGTAGCTGCAGCACCATCTATTCGTGCACCTCTTGTGCCAAGCGGTCGTACTGCTGGCTACAAATATACATCAACTGTGCGCAACCCACCAGCTCCACAGCCAGCTGTTCACATCCAGGGTCAAGAGCCATTGACAGCTTCCATGTTAGCTGCTGCACCACTTCAAGAACAAAAACAAATGCTTGGAGAACGTCTCTTCCCTCTCATTCAGAGAATGCACCCTGATCTTGCTGGCAAAATTACTGGAATGCTTCTAGAAATAGATAATTCTGAACTTTTACATATGTTAGAGCATGGAGAGTCTCTTAAAGCGAAGGTTGATGAGGCTGTTGCTGTTTTGCAAGCTCACCAAGCTAAACAGCAAGCCACTAAGAAAGATTAA

Protein sequence:

>DPOGS203821-PA
MNPGPPNYPMASLYVGDLHSDITEAMLFEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPSDAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKAIDNKAMYDTFSAFGNILSCKVAQDENGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLRDMFEKYGRITSHKVMYKEDGSSRGFGFVAFEDPDAAERACLELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGSAGGYFVPTIPPAQRFYGPAQITQMRPSQRWTAQPPVRPSTQTAASAYPNMQAPFRPTTRGPTQTALRTSLGARPITGQQGVAAAPSIRAPLVPSGRTAGYKYTSTVRNPPAPQPAVHIQGQEPLTASMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAKQQATKKD-