DPOGS203826 | ||
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Transcript | DPOGS203826-TA | 723 bp |
Protein | DPOGS203826-PA | 240 aa |
Genomic position | DPSCF300010 + 2366874-2368090 | |
RNAseq coverage | 1018x (Rank: top 12%) |
Annotation | ||||
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Heliconius | HMEL013347 | 2e-101 | 81.25% |   |
Bombyx | BGIBMGA003730-TA | 2e-103 | 80.83% |   |
Drosophila | CG17454-PA | 6e-51 | 51.00% |   |
EBI UniRef50 | UniRef50_Q95RI7 | 7e-49 | 51.00% | CG17454 n=6 Tax=Endopterygota RepID=Q95RI7_DROME |
NCBI RefSeq | XP_002073905.1 | 1e-55 | 54.84% | GK12901 [Drosophila willistoni] |
NCBI nr blastp | gi|195453707 | 2e-54 | 54.84% | GK12901 [Drosophila willistoni] |
NCBI nr blastx | gi|170037216 | 7e-64 | 53.75% | survival motor neuron protein [Culex quinquefasciatus] |
Group | ||||
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Gene Ontology | GO:0003676 | 2.2e-07 | nucleic acid binding | |
GO:0006397 | 6.4e-05 | mRNA processing | ||
GO:0005634 | 6.4e-05 | nucleus | ||
GO:0003723 | 6.4e-05 | RNA binding | ||
GO:0005737 | 6.4e-05 | cytoplasm | ||
KEGG pathway | cqu:CpipJ_CPIJ004934 | 4e-54 |   | |
  | K12839 (SMNDC1, SPF30) | maps-> | Spliceosome | |
InterPro domain | [85-142] IPR002999 | 2.2e-07 | Tudor domain | |
Orthology group | MCL13431 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS203826-TA
ATGGCTGACGATTTGAGAAATTATAATTTACAATTGCAGCAGGTTGAGGCGGCATTATTGACAGACCCTGAAAACGAAGAGTTGCTGAAACTGAAATCGGATTTGGAAGAAGTAATTGAGTTGACACGCGATCTTATAAAAACTCAAGAGGGTGAATCCAAAGTGCATAATATTCATAGTTCTAGTAATAATGATGATGTTGCAGCTTCCCTGCTGGCTGAGGACGACAACGAATATGTAGAGAAGCCCAACTCAAAGTGGCACCCTGGCGAGAAATGCTTGGCAAAGTGGAAAACGGATGGCGTGTATTATGAGGCAACTATAGAAGAGGTCTATGAGAATAATCTGAAAGTTAGGTTTGATGGCTATTTAAAATCAGAGATCATATCAATTCTAGATATTAAAGCAATGGCATCTGGATCTAAGCGTCCATTAAGTGGCGATGAAAGCAAATCTGGCAAAGGTTACAACAGAGAGTATTTAAAAAAGAAAAAACAAAAGAAACAACAGAGATTTAAACAAATTGAGGAAGAGAGGGAAAGTGAAAAGAATAAGTGGCTATCCTTTCACACAAAGGCATCTAGAAAGCCTGGTGTCAGAACAAAAAGTATATTTGCATCCCCAGACAATTTAACTGGCCGTGTTGGTATTGGAACTTGTGGAATTTCAGGAAAACCAATGACAGAGTATACTCCGGGTGAAAAGTGGAAGAAGGGTGGATAA
>DPOGS203826-PA
MADDLRNYNLQLQQVEAALLTDPENEELLKLKSDLEEVIELTRDLIKTQEGESKVHNIHSSSNNDDVAASLLAEDDNEYVEKPNSKWHPGEKCLAKWKTDGVYYEATIEEVYENNLKVRFDGYLKSEIISILDIKAMASGSKRPLSGDESKSGKGYNREYLKKKKQKKQQRFKQIEEERESEKNKWLSFHTKASRKPGVRTKSIFASPDNLTGRVGIGTCGISGKPMTEYTPGEKWKKGG-