Monarch geneset OGS2.0

DPOGS203826
TranscriptDPOGS203826-TA723 bp
ProteinDPOGS203826-PA240 aa
Genomic positionDPSCF300010 + 2366874-2368090
RNAseq coverage1018x (Rank: top 12%)
Annotation
HeliconiusHMEL0133472e-10181.25% 
BombyxBGIBMGA003730-TA2e-10380.83% 
DrosophilaCG17454-PA6e-5151.00% 
EBI UniRef50UniRef50_Q95RI77e-4951.00%CG17454 n=6 Tax=Endopterygota RepID=Q95RI7_DROME
NCBI RefSeqXP_002073905.11e-5554.84%GK12901 [Drosophila willistoni]
NCBI nr blastpgi|1954537072e-5454.84%GK12901 [Drosophila willistoni]
NCBI nr blastxgi|1700372167e-6453.75%survival motor neuron protein [Culex quinquefasciatus]
Group
Gene OntologyGO:00036762.2e-07nucleic acid binding
GO:00063976.4e-05mRNA processing
GO:00056346.4e-05nucleus
GO:00037236.4e-05RNA binding
GO:00057376.4e-05cytoplasm
KEGG pathwaycqu:CpipJ_CPIJ0049344e-54 
 K12839 (SMNDC1, SPF30)maps-> Spliceosome
InterPro domain[85-142] IPR0029992.2e-07Tudor domain
Orthology groupMCL13431 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS203826-TA
ATGGCTGACGATTTGAGAAATTATAATTTACAATTGCAGCAGGTTGAGGCGGCATTATTGACAGACCCTGAAAACGAAGAGTTGCTGAAACTGAAATCGGATTTGGAAGAAGTAATTGAGTTGACACGCGATCTTATAAAAACTCAAGAGGGTGAATCCAAAGTGCATAATATTCATAGTTCTAGTAATAATGATGATGTTGCAGCTTCCCTGCTGGCTGAGGACGACAACGAATATGTAGAGAAGCCCAACTCAAAGTGGCACCCTGGCGAGAAATGCTTGGCAAAGTGGAAAACGGATGGCGTGTATTATGAGGCAACTATAGAAGAGGTCTATGAGAATAATCTGAAAGTTAGGTTTGATGGCTATTTAAAATCAGAGATCATATCAATTCTAGATATTAAAGCAATGGCATCTGGATCTAAGCGTCCATTAAGTGGCGATGAAAGCAAATCTGGCAAAGGTTACAACAGAGAGTATTTAAAAAAGAAAAAACAAAAGAAACAACAGAGATTTAAACAAATTGAGGAAGAGAGGGAAAGTGAAAAGAATAAGTGGCTATCCTTTCACACAAAGGCATCTAGAAAGCCTGGTGTCAGAACAAAAAGTATATTTGCATCCCCAGACAATTTAACTGGCCGTGTTGGTATTGGAACTTGTGGAATTTCAGGAAAACCAATGACAGAGTATACTCCGGGTGAAAAGTGGAAGAAGGGTGGATAA

Protein sequence:

>DPOGS203826-PA
MADDLRNYNLQLQQVEAALLTDPENEELLKLKSDLEEVIELTRDLIKTQEGESKVHNIHSSSNNDDVAASLLAEDDNEYVEKPNSKWHPGEKCLAKWKTDGVYYEATIEEVYENNLKVRFDGYLKSEIISILDIKAMASGSKRPLSGDESKSGKGYNREYLKKKKQKKQQRFKQIEEERESEKNKWLSFHTKASRKPGVRTKSIFASPDNLTGRVGIGTCGISGKPMTEYTPGEKWKKGG-