| DPOGS203907 | ||
|---|---|---|
| Transcript | DPOGS203907-TA | 2595 bp |
| Protein | DPOGS203907-PA | 864 aa |
| Genomic position | DPSCF300005 - 975788-979158 | |
| RNAseq coverage | 711x (Rank: top 18%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010414 | 0.0 | 72.80% | |
| Bombyx | BGIBMGA011180-TA | 0.0 | 73.38% | |
| Drosophila | gammaCop-PB | 0.0 | 56.36% | |
| EBI UniRef50 | UniRef50_Q9Y678 | 0.0 | 54.41% | Coatomer subunit gamma n=161 Tax=Eukaryota RepID=COPG_HUMAN |
| NCBI RefSeq | NP_001036846.1 | 0.0 | 82.93% | nonclathrin coat protein gamma1-COP [Bombyx mori] |
| NCBI nr blastp | gi|112983936 | 0.0 | 82.93% | nonclathrin coat protein gamma1-COP [Bombyx mori] |
| NCBI nr blastx | gi|112983936 | 0.0 | 82.93% | nonclathrin coat protein gamma1-COP [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005488 | 1.4e-107 | binding | |
| GO:0006886 | 1.2e-103 | intracellular protein transport | ||
| GO:0030117 | 1.2e-103 | membrane coat | ||
| GO:0016192 | 1.2e-103 | vesicle-mediated transport | ||
| GO:0005798 | 1.3e-72 | Golgi-associated vesicle | ||
| GO:0005198 | 1.3e-72 | structural molecule activity | ||
| GO:0030126 | 2.2e-51 | COPI vesicle coat | ||
| KEGG pathway | ||||
| InterPro domain | [5-864] IPR017106 | 0 | Coatomer, gamma subunit | |
| [19-592] IPR011989 | 1.4e-107 | Armadillo-like helical | ||
| [31-537] IPR002553 | 1.2e-103 | Clathrin/coatomer adaptor, adaptin-like, N-terminal | ||
| [16-589] IPR016024 | 8.5e-90 | Armadillo-type fold | ||
| [605-863] IPR014863 | 1.3e-72 | Coatomer, gamma subunit , appendage | ||
| [595-756] IPR013041 | 8.5e-54 | Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain | ||
| [602-752] IPR013040 | 2.2e-51 | Coatomer, gamma subunit, appendage, Ig-like subdomain | ||
| [758-863] IPR009028 | 1.1e-21 | Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain | ||
| [762-864] IPR015873 | 2.8e-15 | Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain | ||
| Orthology group | MCL11188 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203907-TA
ATGAGCTCTTTTCGTCGTGACAAGAAGGAGGAAGAAGATACGGGAGGAAATGTCTTCCAGAATCTTGATAAGACTGCTCTTTTGCAAGAGGCTCGTTATTTCAACTCCACTCCTGTAATTCCAAAAAAATGTGTCCAGATCCTTACGAAAATTCTATACCTACTCAACCAAGGAGAGAAACTAACTACTCAAGAAGCCACAGATATATTTTTTGCGACAACTAAATTGTTTCAATCTAAGGATGTTGTTTTACGTCGTCTTGTGTATTTGTGCATTAAAGAATTAAGCTCAATGGCACAAGATGTAATCATCGTAACGTCCTCTTTGACCAAAGATATGACTGGCAAGGAGGATCTTTATCGAGCTGCAGCAATTCGTGCACTCTGCAGTATAACCGACAGTACTATGCTTCAAGCTATAGAACGGTACATGAAGCAGGCAATTGTGGATAAAAATCCTGCCGTCAGTTCAGCTGCTCTTGTGTCAGCTCTTCATCTATCTGCAACTGTTCCTGAACTGGTTAGGAGATGGGTGAATGATGCGCAGGAGGCAATTATGTCTGATAATGCAATGGTGTCATATCACGCCTTGGCAGTAGTAGCAGGTGCCAGACGGAATGATCGTTTATCAACTGTGAAATTGGTAACAAAACTATCTCGTTCACCTTTACGATCTCCATTTGCTTTATGCCTGTTAGTTAGATATGCTGCCAAATTAGCAGAAGAGGATCAAACTGAAGCATCAGAACCATACTTGGAATTTATAGAATGTTGCTTGCGTCACAAATCTGAGATTGTTGTTTATGAAGCTGCTCATGCTATTGTTAATTTGCGAAAGTCTGCTAGAGATCTTGCCCAAGCTGTGAGCGTTTTACAAATTTTCTGTGGTTCATCCAAGGCAACCCTTCGCCTTGCTGGAGCTCGTACCTTAGCGAAGTTAACAACAAAACATCCAAATGCTGTTGCAGCTTGTGCTGTTGACTTGGAAAACTTGATTTCAGATCCAAATCGCTCTGTTGCTACTTTAGCTGTGACAACTTTGCTTGCCACCGGAGCAGAAAGCTCAATTGATCGCCTAATGAAGCAAATTTCTACTTTCATGTCTGAAATATCAGATGAATTTAAAATTGTAGTTGTTCGTGCCATAAGGCGTCTTTGTACCAAATATCCAAGAAAGCATCAATCGCTGGCCTCATTTTTAGCTGGGATGTTGCGTGATGAAGGTGGCGTACAGTACAAGACAGCAATTGCCGATGCGATTATTGCCTTGATAGAAGAAAATCCAGATGCAAAAGAGACTGGTCTGGCTCATCTTTGTGAATTTATAGAAGATTGCGAACATACATCACTGGCAGTTAGGATTTTGTATGTTTTGGGTCGCGAAGGCCCTAAAGCTCGTCAGCCTTCTCGCTACATTAGATATATCTATAATCGAGTTATTTTGGAATCTGGCCCAGTTCGAGCTGCTGCTGTATCTGCAGTTGCTCGCTTTGGCGCTACTTGCGAGGATCTACTTCCAAATATTAGTGTATTGTTAGCTCGTTGTCAGCTTGACGATGATGATGAAGTTCGCGACAGAGCTATATTTTTTAATGCTATCTTGAATTCCAATGACCCTCAACTAATTAGCGATTATATCACAAACGTACCGACTCCAAACCCAGTTCTCTTGGAAAAAGCCCTTCATGATCACCTTAAAATGAATCCTGATAAACCATTCAACATTCTGTCGGTTCCATCATCAGAACCCACCAAAGAACCTGAAGAAGCCCCTGTTCAAATTGAAACTCGTAAACAGCCAGTTGTTTCTCTTGAAGAATTGTATTCTGAACAATTGAAAGTGGTTCCCGGCATTGAAAAACTCGGTCCACCATTTAAGACATGCAAAGCTATTGACCTTACTGAGCCAGAAACCGAATATCGTGTACGCTGTGTTAAACACATCTTTGCACGACATTTAATTTTGCAGTTTGAATGTTTGAACACACTTAGCGATCAGCTTTTGGAAAAAGTCCGCGTCCGCCTGGAAACGGCTCCTGGGTATAAAATCCTGTGTGAAGTTCCATGCGAGCAACTACCCTATGATAAACAAGGTAGTGTGTTTTGTCTCTTAGAATTCCCTCATGGTCCGATAGAAACCTTGGGCACCTTTGGGGCTACCCTTGAATTTTCAGTTCGAGATTGCGATCCTACCACTGGACTGCCTGATGGCGGTGATGGATATTCCGATACGTATCCTTTAGAGGAATTAGATATTGGATGCGCTGAGCAGTTCCGCGCTCACGTGGCTACTGATGATTGGGAAGCTTCATGGGAAAGAACAGCGTCAGCCGCCGAAGCTTCCGATACCTTTGTACTATCACAGTCAGATATTAATGAAGCAGCATCGGCAGTGTGCACCCATTTAGGTTTACCTAAAGCTGCCATATCAGGTGACGCTGTAAAGGAAATTCGTGGTGGAGGTTTGTGGCGCGAAGGCACACCGATGTTGGTACGTGCACGTCTGGTGGCATCTCAAGGGTCTGTGACTATGAAACTCACGGCTCGCTCTCCTCGTGAAGATGTTGCTACTCTACTTTTAGCTGCAGTTGGCTAA
>DPOGS203907-PA
MSSFRRDKKEEEDTGGNVFQNLDKTALLQEARYFNSTPVIPKKCVQILTKILYLLNQGEKLTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSSMAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDSTMLQAIERYMKQAIVDKNPAVSSAALVSALHLSATVPELVRRWVNDAQEAIMSDNAMVSYHALAVVAGARRNDRLSTVKLVTKLSRSPLRSPFALCLLVRYAAKLAEEDQTEASEPYLEFIECCLRHKSEIVVYEAAHAIVNLRKSARDLAQAVSVLQIFCGSSKATLRLAGARTLAKLTTKHPNAVAACAVDLENLISDPNRSVATLAVTTLLATGAESSIDRLMKQISTFMSEISDEFKIVVVRAIRRLCTKYPRKHQSLASFLAGMLRDEGGVQYKTAIADAIIALIEENPDAKETGLAHLCEFIEDCEHTSLAVRILYVLGREGPKARQPSRYIRYIYNRVILESGPVRAAAVSAVARFGATCEDLLPNISVLLARCQLDDDDEVRDRAIFFNAILNSNDPQLISDYITNVPTPNPVLLEKALHDHLKMNPDKPFNILSVPSSEPTKEPEEAPVQIETRKQPVVSLEELYSEQLKVVPGIEKLGPPFKTCKAIDLTEPETEYRVRCVKHIFARHLILQFECLNTLSDQLLEKVRVRLETAPGYKILCEVPCEQLPYDKQGSVFCLLEFPHGPIETLGTFGATLEFSVRDCDPTTGLPDGGDGYSDTYPLEELDIGCAEQFRAHVATDDWEASWERTASAAEASDTFVLSQSDINEAASAVCTHLGLPKAAISGDAVKEIRGGGLWREGTPMLVRARLVASQGSVTMKLTARSPREDVATLLLAAVG-