| DPOGS203971 | ||
|---|---|---|
| Transcript | DPOGS203971-TA | 618 bp |
| Protein | DPOGS203971-PA | 205 aa |
| Genomic position | DPSCF300005 + 732236-733025 | |
| RNAseq coverage | 42x (Rank: top 72%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010374 | 9e-98 | 83.33% | |
| Bombyx | BGIBMGA000732-TA | 5e-81 | 69.52% | |
| Drosophila | RFeSP-PA | 1e-21 | 40.41% | |
| EBI UniRef50 | UniRef50_Q1G0W2 | 1e-61 | 53.50% | Ubiquinol-cytochrome c reductase iron-sulfur subunit n=21 Tax=Pancrustacea RepID=Q1G0W2_BOMMO |
| NCBI RefSeq | NP_001106738.1 | 2e-62 | 53.50% | ubiquinol-cytochrome c reductase [Bombyx mori] |
| NCBI nr blastp | gi|164448652 | 4e-61 | 53.50% | ubiquinol-cytochrome c reductase [Bombyx mori] |
| NCBI nr blastx | gi|315258472 | 2e-60 | 54.08% | ubiquinol-cytochrome c reductase [Spodoptera litura] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016679 | 8.7e-72 | oxidoreductase activity, acting on diphenols and related substances as donors | |
| GO:0055114 | 8.7e-72 | oxidation-reduction process | ||
| GO:0008121 | 2e-48 | ubiquinol-cytochrome-c reductase activity | ||
| GO:0051537 | 1.4e-37 | 2 iron, 2 sulfur cluster binding | ||
| GO:0016491 | 1.4e-37 | oxidoreductase activity | ||
| GO:0016020 | 4.5e-15 | membrane | ||
| KEGG pathway | api:100161745 | 1e-61 | ||
| K00411 (RIP1, UQCRFS1, petA) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Cardiac muscle contraction | ||||
| Parkinson's disease | ||||
| InterPro domain | [66-205] IPR014349 | 8.7e-72 | Rieske iron-sulphur protein | |
| [60-205] IPR006317 | 2e-48 | Ubiquinol-cytochrome c reductase, iron-sulphur subunit | ||
| [80-204] IPR017941 | 1.4e-37 | Rieske [2Fe-2S] iron-sulphur domain | ||
| [142-153] IPR005805 | 4.5e-15 | Rieske iron-sulphur protein, C-terminal | ||
| [9-77] IPR004192 | 2.6e-13 | Ubiquinol cytochrome reductase, transmembrane domain | ||
| Orthology group | MCL26561 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203971-TA
ATGTGGGCAAAAGTGGTGGAGAGGCTTCATCGAGATATAAAACATCCAAACTTTGATGCATACAGAAAAGAGAAGTTCAAGGATCCGAGCAAAACCACTTGGCATTCTCAAGATGAAAAATACGGTTACACTTATGTGGTTGGCTTTTTTGGATTGCTAGGTGGAATGTATTGTACGAAAACAGAACTTATTCATTTCTTACTAAGCATGAGTGCTCCGGCTGATGTTCTGGCATTGGCTTCGATCGAAATTGATATAGGAAATATAGCACCAGGTGCGTGTTTATCATATAAATGGCGAGGAAAGCCACTTTTTGTGAAACATAGAACTGTGGGTGAAATTTCGGCTGAAGCGAAAACTCCTCTTAGTTTACTGATAGATCCAGAAACACCTGAGCAACGTACCCAGAAGCCTGAATGGCTTATAGTTATAGGCATATGTACTCATTTAGGTTGTGTTCCTGTTCCGAATTCTGGAGATTGGGCTGGTGGATTCTATTGTCCTTGCCATGGCAGTCATTATGATAACGTTGGTAGGGCTCGAAAGGGTCCAGCTCCTCTAAACTTGGAAGTGCCACCTTACACCTTCCTTTCTGATACATTAGTTCTAGTAGGATAG
>DPOGS203971-PA
MWAKVVERLHRDIKHPNFDAYRKEKFKDPSKTTWHSQDEKYGYTYVVGFFGLLGGMYCTKTELIHFLLSMSAPADVLALASIEIDIGNIAPGACLSYKWRGKPLFVKHRTVGEISAEAKTPLSLLIDPETPEQRTQKPEWLIVIGICTHLGCVPVPNSGDWAGGFYCPCHGSHYDNVGRARKGPAPLNLEVPPYTFLSDTLVLVG-