DPOGS203983 | ||
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Transcript | DPOGS203983-TA | 489 bp |
Protein | DPOGS203983-PA | 162 aa |
Genomic position | DPSCF300005 + 1124616-1130472 | |
RNAseq coverage | 21x (Rank: top 79%) |
Annotation | ||||
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Heliconius | HMEL017927 | 2e-31 | 45.33% |   |
Bombyx | BGIBMGA003238-TA | 5e-35 | 48.59% |   |
Drosophila | CG3214-PB | 5e-33 | 42.25% |   |
EBI UniRef50 | UniRef50_Q9VQD7 | 5e-31 | 42.25% | CG3214, isoform A n=33 Tax=Bilateria RepID=Q9VQD7_DROME |
NCBI RefSeq | NP_001165800.1 | 2e-33 | 50.70% | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 [Nasonia vitripennis] |
NCBI nr blastp | gi|288856293 | 3e-32 | 50.70% | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 [Nasonia vitripennis] |
NCBI nr blastx | gi|288856293 | 3e-34 | 50.70% | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 [Nasonia vitripennis] |
Group | ||||
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Gene Ontology | GO:0016020 | 4.8e-25 | membrane | |
GO:0009055 | 4.8e-25 | electron carrier activity | ||
GO:0008137 | 4.8e-25 | NADH dehydrogenase (ubiquinone) activity | ||
KEGG pathway | afm:AFUA_5G06540 | 1e-12 |   | |
  | K00329 (E1.6.5.3) | maps-> | Oxidative phosphorylation | |
  | K00356 (E1.6.99.3) | maps-> | Oxidative phosphorylation | |
InterPro domain | [40-138] IPR007763 | 4.8e-25 | NADH:ubiquinone oxidoreductase, 17.2kDa subunit | |
Orthology group | MCL34528 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS203983-TA
ATGTTAATCAAACTACTAGCTCTTGATAAATGGGCCCGTTTTTTTAAGATTATAGTAAAAAATGGAGGAATCTTAAAATCCACCTCAAAGCTTTGGAAACATGATACCCTTAAAGATGGGACTTATGTGGGAACGGATTCCTTAGGCAATAAATATTACGAAAATAATTACTACATGATAGCTCGAAGTCGTTGGGTCGAGTACAACCCTAACTTTAACTTCGAATATGATGCTAGCCAGGTGTCAGCGGAATGGTATGGTTGGTTACACTACAAGACTGATAGACTACCCTCTCAGGATTGTGCGAAGCACTGCTTAATGACATGCGGCTATGTACAAAGTTGGCTACAACAGCACGAAGAGAATCTAACCGGAACTGATAAAGCCTTCTATCCTTATAGCACTGTTAGATCTCACATAAAAGTATGGAATGGTGCATGTCTGTGTGAATCTGTGCCTGATTGTCCGGATACTACGAATAAAAAATAG
>DPOGS203983-PA
MLIKLLALDKWARFFKIIVKNGGILKSTSKLWKHDTLKDGTYVGTDSLGNKYYENNYYMIARSRWVEYNPNFNFEYDASQVSAEWYGWLHYKTDRLPSQDCAKHCLMTCGYVQSWLQQHEENLTGTDKAFYPYSTVRSHIKVWNGACLCESVPDCPDTTNKK-