| DPOGS204004 | ||
|---|---|---|
| Transcript | DPOGS204004-TA | 423 bp |
| Protein | DPOGS204004-PA | 140 aa |
| Genomic position | DPSCF300470 - 49554-50842 | |
| RNAseq coverage | 0x (Rank: top 96%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011246 | 2e-67 | 92.14% | |
| Bombyx | BGIBMGA009751-TA | 2e-76 | 100.00% | |
| Drosophila | RpL23-PA | 4e-73 | 95.00% | |
| EBI UniRef50 | UniRef50_P62829 | 1e-68 | 90.71% | 60S ribosomal protein L23 n=330 Tax=root RepID=RL23_HUMAN |
| NCBI RefSeq | NP_001037227.1 | 4e-75 | 100.00% | ribosomal protein L23 [Bombyx mori] |
| NCBI nr blastp | gi|112984274 | 1e-73 | 100.00% | ribosomal protein L23 [Bombyx mori] |
| NCBI nr blastx | gi|112984274 | 3e-73 | 100.00% | ribosomal protein L23 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 1.1e-108 | ribosome | |
| GO:0006412 | 1.1e-108 | translation | ||
| GO:0003735 | 1.1e-108 | structural constituent of ribosome | ||
| KEGG pathway | nvi:100118197 | 3e-74 | ||
| K02894 (RP-L23e, RPL23) | maps-> | Ribosome | ||
| InterPro domain | [1-140] IPR000218 | 1.1e-108 | Ribosomal protein L14b/L23e | |
| [9-140] IPR023571 | 1e-48 | Ribosomal protein L14 domain | ||
| Orthology group | MCL13254 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204004-TA
ATGTCTAAGAGAGGACGTGGTGGTTCCGCGGGAGCGAAGTTCCGCATCTCGCTGGGTCTCCCAGTGGGTGCCGTCATAAATTGCGCAGACAACACGGGTGCCAAGAACCTGTATGTCATTGCTGTACAAGGTATCAAGGGTCGTCTGAACAGATTGCCAGCGGCTGGTTCAGGTGACATGATTGTAGCCACCGTCAAAAAGGGTAAACCAGAACTCAGGAAAAAGGTAATGCCAGCGGTGGTGATTCGGCAGCGGAAACCGTTCAGAAGGAGGGATGGGGTGTTTATATATTTTGAGGACAATGCGGGTGTCATTGTTAACAATAAGGGTGAAATGAAAGGTTCGGCGATCACAGGCCCCGTGGCTAAGGAATGCGCTGACCTTTGGCCCCGTATTGCATCGAATGCCAGCTCGATAGCTTGA
>DPOGS204004-PA
MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA-