DPOGS204119 | ||
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Transcript | DPOGS204119-TA | 525 bp |
Protein | DPOGS204119-PA | 174 aa |
Genomic position | DPSCF300184 - 61667-66460 | |
RNAseq coverage | 48x (Rank: top 71%) |
Annotation | ||||
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Heliconius | HMEL012901 | 1e-53 | 81.08% |   |
Bombyx | BGIBMGA013607-TA | 1e-42 | 70.87% |   |
Drosophila | CG30502-PB | 1e-25 | 49.55% |   |
EBI UniRef50 | UniRef50_Q17EC2 | 2e-27 | 58.16% | Fatty acid hydroxylase n=3 Tax=Diptera RepID=Q17EC2_AEDAE |
NCBI RefSeq | XP_001986080.1 | 5e-30 | 52.21% | GH20733 [Drosophila grimshawi] |
NCBI nr blastp | gi|195025549 | 7e-29 | 52.21% | GH20733 [Drosophila grimshawi] |
NCBI nr blastx | gi|157138472 | 3e-32 | 55.86% | fatty acid hydroxylase [Aedes aegypti] |
Group | ||||
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Gene Ontology | GO:0005506 | 1.6e-07 | iron ion binding | |
GO:0006633 | 1.6e-07 | fatty acid biosynthetic process | ||
GO:0055114 | 1.6e-07 | oxidation-reduction process | ||
GO:0016491 | 1.6e-07 | oxidoreductase activity | ||
KEGG pathway | afm:AFUA_1G15820 | 1e-11 |   | |
  | K00517 (E1.14.-.-) | maps-> | Naphthalene and anthracene degradation | |
  |   |   | Stilbenoid, diarylheptanoid and gingerol biosynthesis | |
  |   |   | Limonene and pinene degradation | |
  |   |   | gamma-Hexachlorocyclohexane degradation | |
InterPro domain | [74-141] IPR006694 | 1.6e-07 | Fatty acid hydroxylase | |
Orthology group | MCL15674 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204119-TA
ATGCCGTCTCGTTCAAACGCATCACTTGTGTCAGAGGATAAATATCACCCTAGCTTGGAAATAGATACTGCTGGCATAACATTTAAGAAACTCAATGTTAAACCTGTGACGAAATATAATTACAACAAGGCAGACTACAATGTGGTTAGTGAGGCATTGGCACGTAGAGACTGGCCTACTATTTTAACGGAGGTGCCTTTCGATGGTCTGAGACAGGTTTTCCCTCCCATACCGGCGTTGGTGATAGCCTCAGTACTGTTTCTACCTATTTGGTGCACATTGTCATATCCCTGGATCAAAATGGCTGGCGGTCTTATAGGTTATCTTGTGTATGATATGATTCATTACTACGTGCACCACGGCTCACCGAGCGACGGTACATACCTTTACGCGATGAAACGCTATCATTCAAATCATCATTTCGTGAACCACGACAAAGCTTTTGGTATAAGCAACAAGCTGTGGGATCACGTTTTCAAAACGCTGGTCCACGTGAAGAAATTGGGTTTCGGTCTCAAGTGGTAG
>DPOGS204119-PA
MPSRSNASLVSEDKYHPSLEIDTAGITFKKLNVKPVTKYNYNKADYNVVSEALARRDWPTILTEVPFDGLRQVFPPIPALVIASVLFLPIWCTLSYPWIKMAGGLIGYLVYDMIHYYVHHGSPSDGTYLYAMKRYHSNHHFVNHDKAFGISNKLWDHVFKTLVHVKKLGFGLKW-