DPOGS204169 | ||
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Transcript | DPOGS204169-TA | 711 bp |
Protein | DPOGS204169-PA | 236 aa |
Genomic position | DPSCF300034 - 234525-236798 | |
RNAseq coverage | 7x (Rank: top 86%) |
Annotation | ||||
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Heliconius | HMEL009961 | 1e-117 | 96.73% |   |
Bombyx | BGIBMGA005107-TA | 1e-116 | 89.04% |   |
Drosophila | spn-A-PA | 6e-74 | 66.15% |   |
EBI UniRef50 | UniRef50_Q06609 | 3e-92 | 77.10% | DNA repair protein RAD51 homolog 1 n=204 Tax=root RepID=RAD51_HUMAN |
NCBI RefSeq | NP_001037484.1 | 3e-115 | 89.04% | Rad51 homolog [Bombyx mori] |
NCBI nr blastp | gi|112984536 | 5e-114 | 89.04% | Rad51 homolog [Bombyx mori] |
NCBI nr blastx | gi|112984536 | 2e-112 | 87.87% | Rad51 homolog [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0000166 | 1.6e-16 | nucleotide binding | |
KEGG pathway | cqu:CpipJ_CPIJ003679 | 1e-95 |   | |
  | K04482 (RAD51) | maps-> | Pancreatic cancer | |
  |   |   | Pathways in cancer | |
  |   |   | Homologous recombination | |
InterPro domain | [77-214] IPR013632 | 1.7e-72 | DNA recombination and repair protein Rad51, C-terminal | |
[15-84] IPR010995 | 1.6e-16 | DNA repair Rad51/transcription factor NusA, alpha-helical | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204169-TA
ATGGCTACAACAGCATCTGCTGCTACGGCTACAATAGAGGAAGATTTGGACGAATGTGGACCACAGTTGATTACAAAATTAGAGGGTAATGGAATTACTTCAGGGGATATAAAAAAGTTAGAAGAGGCTGGGTATCATACTGTTGAGTCTGTCGCATATGCTCCAAAGAAATGGTTAATAACAATAAAAGGCATCTCCGAAGCAAAAGCTGATAAAATACTGTCAGAAGCTTCAAAATTGGTACCAATGGGATTTACAACAGCTACAGAGTTCCACCAGAAGAGGGCAGAAATTATACAGTTGACAACGGGATCAAAAGAACTTGATAGACTACTTGGTGGTGGCATAGAAACAGGCTCAATCACTGAGATCTTTGGAGAGTTTCGGACAGGAAAAACACAGTTGTGTCATACTTTAGCTGTGACTTGTCAGCTTCCTATTGAGCAATCTGGTGGAGAAGGGAAGTGTATGTACATAGACACTGAAGGAACATTCAGACCAGAACGATTACTGGCTGTGGCTCAGAGATATGGAATGGAAAGTGCCGCAGTTCTTGATAATGTGGCATATGCAAGAGCTTATAACACAGATCATCAAACCCAGCTCTTAGTACAAGCGTGTGCTATGATGGCTGAATCTAGAACACTTGCTCGGACTAAAGGCACTTTAACAATAACGAAACCGGTGGGTAAAAAACATTTAAATAGCTAA
>DPOGS204169-PA
MATTASAATATIEEDLDECGPQLITKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILSEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLGGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMESAAVLDNVAYARAYNTDHQTQLLVQACAMMAESRTLARTKGTLTITKPVGKKHLNS-