DPOGS204170 | ||
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Transcript | DPOGS204170-TA | 1017 bp |
Protein | DPOGS204170-PA | 338 aa |
Genomic position | DPSCF300034 - 230338-232711 | |
RNAseq coverage | 145x (Rank: top 54%) |
Annotation | ||||
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Heliconius | HMEL009961 | 1e-162 | 86.39% |   |
Bombyx | BGIBMGA005107-TA | 0.0 | 97.25% |   |
Drosophila | spn-A-PA | 7e-131 | 69.06% |   |
EBI UniRef50 | UniRef50_Q06609 | 4e-157 | 78.40% | DNA repair protein RAD51 homolog 1 n=204 Tax=root RepID=RAD51_HUMAN |
NCBI RefSeq | NP_001037484.1 | 0.0 | 97.55% | Rad51 homolog [Bombyx mori] |
NCBI nr blastp | gi|112984536 | 0.0 | 97.55% | Rad51 homolog [Bombyx mori] |
NCBI nr blastx | gi|112984536 | 0.0 | 96.45% | Rad51 homolog [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0006281 | 7e-179 | DNA repair | |
GO:0005524 | 7e-179 | ATP binding | ||
GO:0003684 | 7e-179 | damaged DNA binding | ||
GO:0008094 | 7e-179 | DNA-dependent ATPase activity | ||
GO:0000166 | 1.6e-16 | nucleotide binding | ||
GO:0017111 | 4.8e-11 | nucleoside-triphosphatase activity | ||
KEGG pathway | cqu:CpipJ_CPIJ003679 | 3e-160 |   | |
  | K04482 (RAD51) | maps-> | Pancreatic cancer | |
  |   |   | Pathways in cancer | |
  |   |   | Homologous recombination | |
InterPro domain | [1-338] IPR016467 | 1.4e-190 | DNA recombination and repair protein, RecA-like | |
[24-338] IPR011941 | 7e-179 | DNA recombination/repair protein Rad51 | ||
[77-337] IPR013632 | 1e-144 | DNA recombination and repair protein Rad51, C-terminal | ||
[15-84] IPR010995 | 1.6e-16 | DNA repair Rad51/transcription factor NusA, alpha-helical | ||
[118-305] IPR003593 | 4.8e-11 | ATPase, AAA+ type, core | ||
Orthology group | MCL12269 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204170-TA
ATGGCTACAACAGCATCTGCTGCCACGGCTACAATAGAGGAAGATTTGGACGAATGTGGACCACAGTTGATTACAAAATTAGAGGGTAATGGAATTACTTCAGGGGATATAAAAAAGTTAGAAGAGGCTGGGTATCATACTGTTGAGTCTGTCGCATATGCTCCAAAGAAATGGTTAATAACAATAAAGGGCATCTCCGAAGCCAAAGCTGATAAAATACTGTCAGAAGCTTCAAAATTGGTACCAATGGGATTTACAACAGCTACAGAGTTCCACCAGAAGAGGGCAGAAATTATACAGTTGACAACGGGATCAAAAGAACTTGATAGACTACTTGGTGGTGGCATAGAAACAGGCTCAATCACTGAGATCTTTGGAGAGTTTCGGACAGGAAAAACACAGTTGTGTCATACTTTAGCTGTGACTTGTCAGCTTCCGATTGAGCAATCTGGTGGAGAAGGGAAGTGTATGTACATAGACACTGAAGGAACGTTCAGACCAGAACGATTACTGGCTGTGGCTCAGAGATATGGAATGGAAAGTGCCGCAGTTCTCGATAATGTGGCGTATGCAAGGGCTTATAACACAGATCATCAAACCCAGCTCTTAGTACAAGCGTGTGCTATGATGGCTGAATCTAGATACTCATTGCTGATAGTTGATAGTGCGACAGCGCTTTACAGAACTGACTATTCTGGTAGAGGGGAATTGAATTCAAGACAATTACATCTCGGAAGATTTATGAGAATGTTACTCAGATTGGCCGATGAGTTCGGTGTAGCTGTTATCATAACAAATCAAGTGGTGGCACAGGTCGATTCCGTTGGTGTGTTCAATGCTGATACAAAGAAACCTATCGGGGGACATATTATAGCTCACGCATCGACCACAAGACTTTATCTCCGGAAGGGCAGAGGAGATAATAGAGTATGCAAGATATATGACAGCCCCTGTCTGCCGGAAACGGAAGCCATGTTTGCTATCAGCACCGAAGGCATCACAGATGCTAAGGAATGA
>DPOGS204170-PA
MATTASAATATIEEDLDECGPQLITKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILSEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLGGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMESAAVLDNVAYARAYNTDHQTQLLVQACAMMAESRYSLLIVDSATALYRTDYSGRGELNSRQLHLGRFMRMLLRLADEFGVAVIITNQVVAQVDSVGVFNADTKKPIGGHIIAHASTTRLYLRKGRGDNRVCKIYDSPCLPETEAMFAISTEGITDAKE-