Monarch geneset OGS2.0

DPOGS204217
TranscriptDPOGS204217-TA2058 bp
ProteinDPOGS204217-PA685 aa
Genomic positionDPSCF300046 - 810480-816309
RNAseq coverage316x (Rank: top 36%)
Annotation
HeliconiusHMEL0151350.073.96% 
BombyxBGIBMGA007497-TA0.073.56% 
DrosophilaCG2118-PA0.049.63% 
EBI UniRef50UniRef50_Q99MR81e-18048.89%Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial n=130 Tax=cellular organisms RepID=MCCA_MOUSE
NCBI RefSeqXP_001845478.10.051.15%methylcrotonoyl-CoA carboxylase alpha chain, mitochondrial [Culex quinquefasciatus]
NCBI nr blastpgi|3485430830.052.59%PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial [Oreochromis niloticus]
NCBI nr blastxgi|3485430830.051.70%PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial [Oreochromis niloticus]
Group
Gene OntologyGO:00055241.4e-51ATP binding
GO:00038241.4e-51catalytic activity
GO:00168745.6e-47ligase activity
GO:00081523.5e-43metabolic process
KEGG pathwaycqu:CpipJ_CPIJ0038410.0 
 K01968 (E6.4.1.4A)maps-> Valine, leucine and isoleucine degradation
InterPro domain[9-146] IPR0161851.4e-51PreATP-grasp-like fold
[35-161] IPR0138177.8e-50Pre-ATP-grasp fold
[348-455] IPR0054825.6e-47Biotin carboxylase, C-terminal
[35-143] IPR0054813.5e-43Carbamoyl-phosphate synthase, large subunit, N-terminal
[316-462] IPR0138167.9e-43ATP-grasp fold, subdomain 2
[343-460] IPR0110542.1e-41Rudiment single hybrid motif
[149-299] IPR0054794.4e-39Carbamoyl-phosphate synthetase, large subunit, ATP-binding
[162-235] IPR0138151.3e-22ATP-grasp fold, subdomain 1
[598-682] IPR0110536.3e-14Single hybrid motif
[618-679] IPR0000899.3e-11Biotin/lipoyl attachment
Orthology groupMCL11919 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204217-TA
ATGTACGCCAATAGATTTTTAAAAATAAGTTCATTGAACTTACAAAATAGTGTGAGGTTTAATCATGCTCATCAATTAAAGTCTGATATACAAAGGAGGCATATTGATAAAGTTCTGATAGCAAATAGAGGAGAAATAGCATGCAGGGTGATGAGAACAGCTCGTAAATTAGGAGTTCGGACAGTTGCTGTATATTCAGAGGCTGATAAAAATGCTATGCATGTTGAAATGGCTGATGAAGCCTATCACATTGGACCAGCGCCATCAACACAGAGTTATTTAAACACATCAAAGATACTGGAAGTGGCTAAGAGATCAAAAAGTCAAGCTATACATCCGGGCTATGGATTTCTGTCAGAAAATGTTGAATTCTGTAAGCAGTGCGCTGATGAGGGGGTAATCTTTATTGGACCACCCACTTCAGCAATAAGGGATATGGGAATTAAAAGCACATCGAAAGCTATTATGTCAAATGCCGGAGTCCCAATTGTCAGAGGATATCATGGAGAAGACCAAAGTAAAGAGAGGCTTCAGGCTGAAGCTCAAAAAATTGGATTTCCGTTAATGATTAAAGCTGTGAGAGGTGGCGGAGGCAAAGGTATGAGAATAGCAATGACGGAAGCTGAATTTTTACCTCAATTAGAATCCGCTAAACGTGAGTCTTTAAAGTCATTTGGTGATGAAAGTATGCTTCTGGAACAATACATCACAGACCCTCGCCATGTAGAAGTGCAGGTTTTCGCAGATATGTATGGAAATGCCGTTCATTTGTTTGAGAGGGACTGCTCAGTTCAAAGACGGCATCAGAAAATTATTGAAGAAGCTCCACATGCTGCAGCTCGGCCTCTAGGTGGTCAGCATCACAAAGGTGTTGGGCTCTCTGTAACAAAGATTTGCCAACGAATTTGTACAAGTATAATACTATTCATATATAACTTTCCATTGCTAGGTACTGATTTAGTCGAATGGCAGCTCCGTATAGCCGCCGGCAAGCCGCTGCCTGTTTCACAAGAAGACATCGTCCGCCGCGGTCACGCCGTAGAATGTAGGATATACGCTGAAGAACCACGAGCTGGGTTCTTGCCACGTGCTGGGACACTGCACAGACTCACACAGCCAACACCGGAGGAAAACGTTCGAGTCGAGACGGGTGTCAGAGAGGGGCACGAGGTGTCGGTGCACTATGATCCTATGATAGCCAAGCTGGTTGTATGGGGCCAGGATAGACATGAAGCTCTCGCTAGGACTAAGAGAAAACTATCCGAATATCAGGTTGCAGGTCTTGAGACGAACGTTAATTTCTTGCTGCGTCTGAGTGGCGCTAGTGCGTTCGTGGCGGGCGACGTGCACACGGCTTTCATTCCACAGCACGAGGCTGAATTGTTTCCCCAATCCGACACGGTGCTAAGTGAGGATAAAGCTATACAGGCTGCTTTAGGTTATGTTATCAAGTGCCAAAAAGATTCAACTGCAAACAACTCCTGGAAGGGAATCTCAATAAAACCAACAGCGTGGCGTCCTAATTATAATCTAGAGAAAATTGTTAATTTAAAATTCGATGACAAAGATACCAAAGTAACTATCAAGTACCAAAATGCACCTAACACATATCAAGTTAAAGTAAATGATGGCGAATGGAAGTCAGTGGAGGGAGCATTGAAGGCAACTGAACAAGGGCTGAGGCTGGTATCAAAACTGGATGGCCGGACCAGCAACGTTGGCTTCTTGACACATGACAATGAAATACATGTGTACGATGAGAACGGTCAAACAGTGTTACATTTGCCACAACCGAAGCATCAGGGACCATCCGGCCAAGACTCGACCTCATCAGCTAACGTCGCCTTCTCGCCAACAGCGGGGGTTATGGAAAAAATACTTGTCAGCAAGGGAGACAAGGTTGTTAAAGGCCAACCAGTGTTTGTGGTTATAGCTATGAAGATGGAGTACGTTGTCCGCTCGCCGCGAGATGGCGTTGTATCGGAAGTGGCAAAATTTGTTCAAGGAGACGCCGTCGGAAAGGGCGTTCAAGTCGTTACTCTTGAATCAGAAAGTTAA

Protein sequence:

>DPOGS204217-PA
MYANRFLKISSLNLQNSVRFNHAHQLKSDIQRRHIDKVLIANRGEIACRVMRTARKLGVRTVAVYSEADKNAMHVEMADEAYHIGPAPSTQSYLNTSKILEVAKRSKSQAIHPGYGFLSENVEFCKQCADEGVIFIGPPTSAIRDMGIKSTSKAIMSNAGVPIVRGYHGEDQSKERLQAEAQKIGFPLMIKAVRGGGGKGMRIAMTEAEFLPQLESAKRESLKSFGDESMLLEQYITDPRHVEVQVFADMYGNAVHLFERDCSVQRRHQKIIEEAPHAAARPLGGQHHKGVGLSVTKICQRICTSIILFIYNFPLLGTDLVEWQLRIAAGKPLPVSQEDIVRRGHAVECRIYAEEPRAGFLPRAGTLHRLTQPTPEENVRVETGVREGHEVSVHYDPMIAKLVVWGQDRHEALARTKRKLSEYQVAGLETNVNFLLRLSGASAFVAGDVHTAFIPQHEAELFPQSDTVLSEDKAIQAALGYVIKCQKDSTANNSWKGISIKPTAWRPNYNLEKIVNLKFDDKDTKVTIKYQNAPNTYQVKVNDGEWKSVEGALKATEQGLRLVSKLDGRTSNVGFLTHDNEIHVYDENGQTVLHLPQPKHQGPSGQDSTSSANVAFSPTAGVMEKILVSKGDKVVKGQPVFVVIAMKMEYVVRSPRDGVVSEVAKFVQGDAVGKGVQVVTLESES-